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13_1_20cm_full_scaffold_4531

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_4531_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2..499
DNA (498bp) protein (166aa)
translation initiation factor IF-3 n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B33C08
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RBG_16_Actinobacteria_68_12_curated
translation initiation factor 3 (bIF-3)
13_1_20cm_full_scaffold_4531_2
unknown

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465..578
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_full_scaffold_4531_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


583..945
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CCL9_9ACTN
50S ribosomal protein L20P; K02887 large subunit ribosomal protein L20 Tax=RBG_16_Actinobacteria_68_12_curated
50S ribosomal protein L20
13_1_20cm_full_scaffold_4531_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1080..1616
DNA (537bp) protein (179aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H5_CONWI
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RBG_16_Actinobacteria_68_12_curated
tRNA/rRNA methyltransferase SpoU
13_1_20cm_full_scaffold_4531_5
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1639..2232)
DNA (594bp) protein (198aa)
LemA family protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N9W0_CORGP
LemA family protein; K03744 LemA protein Tax=RBG_16_Actinobacteria_67_15_curated
lemA; protein LemA
13_1_20cm_full_scaffold_4531_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2259..2969)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036F6B46
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
type 12 methyltransferase
13_1_20cm_full_scaffold_4531_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


3174..4214
DNA (1041bp) protein (347aa)
phenylalanyl-tRNA synthetase, subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Actinobacteria_68_12_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWF9_RUBXD
phenylalanyl-tRNA synthetase subunit alpha
13_1_20cm_full_scaffold_4531_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4214..6505
DNA (2292bp) protein (764aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RBG_16_Actinobacteria_68_12_curated
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H3_CONWI
13_1_20cm_full_scaffold_4531_9
Zygosaccharomyces rouxii, Zygosaccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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6610..7494
DNA (885bp) protein (295aa)
ZYRO0F02728p n=1 Tax=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) RepID=C5DX72_ZYGRC
ZYRO0F02728p {ECO:0000313|EMBL:CAR28383.1}; TaxID=559307 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces.;"
psrP; Large surface exposed glycoprotein PsrP
13_1_20cm_full_scaffold_4531_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7613..8290
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E509_9ACTN
Uncharacterized protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_full_scaffold_4531_11
unknown

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comp(8299..8580)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_full_scaffold_4531_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8564..8974)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UKC5_CELFN
Putative integral membrane protein {ECO:0000313|EMBL:EWC63924.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora sp
hypothetical protein
13_1_20cm_full_scaffold_4531_13
unknown

Not on your lists

comp(8955..9365)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_full_scaffold_4531_14
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

9509..9982
DNA (474bp) protein (158aa)
arginine repressor n=1 Tax=Thermus islandicus RepID=UPI0003B5773D
arginine repressor ArgR; K03402 transcriptional regulator of arginine metabolism Tax=RBG_16_Acidobacteria_64_8_curated
Arginine repressor
13_1_20cm_full_scaffold_4531_15
unknown

Not on your lists

comp(9979..10323)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_full_scaffold_4531_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10320..10964)
DNA (645bp) protein (215aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_full_scaffold_4531_17
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10990..11961
DNA (972bp) protein (324aa)
pdhA-2; pyruvate dehydrogenase subunit alpha (lipoamide) (EC:1.2.4.1)
acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4D415
Pyruvate dehydrogenase {ECO:0000313|EMBL:EMT52556.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
13_1_20cm_full_scaffold_4531_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11954..12589
DNA (636bp) protein (212aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Actinobacteria_68_12_curated
TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X353_ANEAE
transketolase, central region
Displaying 18 items

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