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13_1_20cm_full_scaffold_4532

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_4532_1
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1..423
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B3A55
Response regulator uvrY {ECO:0000313|EMBL:EGK72275.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatili
two component LuxR family transcriptional regulator
13_1_20cm_full_scaffold_4532_2
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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564..1745
DNA (1182bp) protein (394aa)
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037C7AEE rbh
Putative fatty acid desaturase {ECO:0000313|EMBL:EDM82202.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter
13_1_20cm_full_scaffold_4532_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1815..2573
DNA (759bp) protein (253aa)
Probable transcriptional regulatory protein A176_06358 n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SM66_9DELT rbh
Probable transcriptional regulatory protein A176_06358 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococc
hypothetical protein
13_1_20cm_full_scaffold_4532_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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2606..3112
DNA (507bp) protein (169aa)
rimI; ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038201C2
glycoprotease family metalloendopeptidase
13_1_20cm_full_scaffold_4532_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3129..3539)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRP8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40452.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_20cm_full_scaffold_4532_6
RifOxyB12_full_Sideroxydans_59_6_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3562..3858)
DNA (297bp) protein (99aa)
def; N-formylmethionyl-tRNA deformylase/polypeptide deformylase (EC:3.5.1.31 3.5.1.88)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RifOxyB12_full_Sideroxydans_59_6_curated
Peptide deformylase n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IU06_HERSS
13_1_20cm_full_scaffold_4532_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4054..5295)
DNA (1242bp) protein (414aa)
pyrroloquinoline quinone biosynthesis protein PqqE n=1 Tax=Azoarcus toluclasticus RepID=UPI0003655086
pqqE; pyrroloquinoline quinone biosynthesis protein E
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=748247 species="Bacteria; Proteobacteria; B
13_1_20cm_full_scaffold_4532_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5292..5570)
DNA (279bp) protein (93aa)
Coenzyme PQQ synthesis D n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FD3_DECAR
coenzyme PQQ synthesis D; K06138 pyrroloquinoline quinone biosynthesis protein D Tax=RBG_16_Gamma2_60_9_curated
coenzyme PQQ synthesis D
13_1_20cm_full_scaffold_4532_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5575..6264)
DNA (690bp) protein (230aa)
pyrroloquinoline quinone biosynthesis protein PqqC (EC:1.3.3.11); K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=RBG_16_Gamma2_60_9_curated
pyrroloquinoline quinone biosynthesis protein PqqC (EC:1.3.3.11)
Pyrroloquinoline-quinone synthase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPT5_VARPS rbh
13_1_20cm_full_scaffold_4532_10
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6261..7169)
DNA (909bp) protein (303aa)
Coenzyme PQQ synthesis protein B n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWK1_RUBGI
pqqB; pyrroloquinoline quinone biosynthesis protein B Tax=RBG_16_Gamma2_60_9_curated
pqqB; coenzyme PQQ biosynthesis protein B PqqB
13_1_20cm_full_scaffold_4532_11
unknown

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comp(7256..7522)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_full_scaffold_4532_12
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7602..8207)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S688_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJK17742.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;
hypothetical protein
13_1_20cm_full_scaffold_4532_13

Not on your lists

comp(8238..8951)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZE60_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42512.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 13 items

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