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13_1_20cm_full_scaffold_50

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_50_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..699)
DNA (699bp) protein (233aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_50_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(696..1994)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38238.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_20cm_full_scaffold_50_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2250..5447)
DNA (3198bp) protein (1066aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
surface antigen (D15)
13_1_20cm_full_scaffold_50_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5453..5860)
DNA (408bp) protein (136aa)
Ribosomal silencing factor RsfS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N4_GEMAT
hypothetical protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
iojap-like protein
13_1_20cm_full_scaffold_50_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(5901..6344)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL9_GEMAT
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplI; 50S ribosomal protein L9
13_1_20cm_full_scaffold_50_6
unknown

Not on your lists

comp(6360..6881)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_full_scaffold_50_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(6932..7153)
DNA (222bp) protein (74aa)
30S ribosomal protein S18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N7_GEMAT
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsR; 30S ribosomal protein S18
13_1_20cm_full_scaffold_50_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(7150..7524)
DNA (375bp) protein (125aa)
30S ribosomal protein S6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N8_GEMAT
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsF; 30S ribosomal protein S6
13_1_20cm_full_scaffold_50_9
unknown

Not on your lists

7821..8441
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_20cm_full_scaffold_50_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8489..8758
DNA (270bp) protein (90aa)
ThiamineS n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNQ2_HALO1
sulfur transfer protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
sulfur transfer protein
13_1_20cm_full_scaffold_50_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8755..9876
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNQ3_HALO1 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_50_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9909..10634
DNA (726bp) protein (242aa)
TonB-dependent receptor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD91_SALRM
cirA; TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CBH25996.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
13_1_20cm_full_scaffold_50_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10631..11734)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P0_GEMAT rbh
GTP-binding protein; K06942 Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein
13_1_20cm_full_scaffold_50_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11735..12277)
DNA (543bp) protein (181aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=GWC2_Gemmatimonadetes_71_10_curated
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PTH_GEMAT
13_1_20cm_full_scaffold_50_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(12281..13027)
DNA (747bp) protein (249aa)
50S ribosomal protein L25 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q0_GEMAT
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplY; 50S ribosomal protein L25
13_1_20cm_full_scaffold_50_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13069..14022)
DNA (954bp) protein (318aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q1_GEMAT rbh
13_1_20cm_full_scaffold_50_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14067..14981)
DNA (915bp) protein (305aa)
Marine sediment metagenome DNA, contig: S01H4_L03438 Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_full_scaffold_50_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14978..17227)
DNA (2250bp) protein (750aa)
ABC transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
gliding-associated ABC transporter substrate-binding protein GldG
ABC transporter alias=ACD52_C00067G00004,ACD52_22964.5931.8G0004,ACD52_22964.5931.8_4 id=75193 tax=ACD52 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
13_1_20cm_full_scaffold_50_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17230..18168)
DNA (939bp) protein (313aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFC0_RHOMR
13_1_20cm_full_scaffold_50_20
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18230..19369)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCW2_NIAKG
lipoprotein precursor Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_20cm_full_scaffold_50_21
unknown

Not on your lists

comp(19366..19725)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_full_scaffold_50_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19792..22065)
DNA (2274bp) protein (758aa)
glutamate carboxypeptidase II (EC:3.4.17.21)
Glutamate carboxypeptidase II {ECO:0000313|EMBL:ABJ85541.1}; EC=3.4.17.21 {ECO:0000313|EMBL:ABJ85541.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales
Glutamate carboxypeptidase II n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XS4_SOLUE
13_1_20cm_full_scaffold_50_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22107..22781)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YT69_9ALTE
amidohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
amidohydrolase
Displaying 23 items

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