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13_1_20cm_full_scaffold_573

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_573_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..1565
DNA (1563bp) protein (521aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA mismatch repair protein mutS
13_1_20cm_full_scaffold_573_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1567..2169
DNA (603bp) protein (201aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TAF4_BURSG
TonB-like Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_20cm_full_scaffold_573_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2153..3538
DNA (1386bp) protein (462aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_full_scaffold_573_4

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3539..4558
DNA (1020bp) protein (340aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL0_GEMAT
13_1_20cm_full_scaffold_573_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4578..5447
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK9_GEMAT
rhomboid family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S54, rhomboid domain protein
13_1_20cm_full_scaffold_573_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5452..7323
DNA (1872bp) protein (624aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_573_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7368..8312
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_573_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8287..8520
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_573_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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8530..9024
DNA (495bp) protein (165aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
hypothetical protein
13_1_20cm_full_scaffold_573_10
CSP1_5_NC10, NC10, Bacteria

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9027..9374
DNA (348bp) protein (116aa)
Transcriptional coactivator/pterin dehydratase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA0_9BACT
transcriptional coactivator/pterin dehydratase
transcriptional coactivator/pterin dehydratase Tax=CSP1_5_NC10
13_1_20cm_full_scaffold_573_11
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9371..9844
DNA (474bp) protein (158aa)
para-aminobenzoate synthase subunit I (EC:4.1.3.27)
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:ACL55104.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ACL55104.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
Para-aminobenzoate synthase, subunit I n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IU59_METNO
13_1_20cm_full_scaffold_573_12
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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9816..10733
DNA (918bp) protein (306aa)
aminodeoxychorismate synthase subunit I (EC:2.6.1.85); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] Tax=RBG_13_Chloroflexi_48_17_curated
para-aminobenzoate synthase subunit I (EC:4.1.3.27)
Para-aminobenzoate synthase component I n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LR92_9PROT
13_1_20cm_full_scaffold_573_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10678..11853)
DNA (1176bp) protein (392aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_20cm_full_scaffold_573_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11992..12621)
DNA (630bp) protein (210aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Membrane protein oxaA
13_1_20cm_full_scaffold_573_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12606..13619)
DNA (1014bp) protein (338aa)
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_full_scaffold_573_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(13620..13847)
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Cyanothece RepID=YIDD_CYAA5
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_full_scaffold_573_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14478..15872
DNA (1395bp) protein (465aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Chromosomal replication initiator protein dnaA
13_1_20cm_full_scaffold_573_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16114..17226
DNA (1113bp) protein (371aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
13_1_20cm_full_scaffold_573_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17209..17751)
DNA (543bp) protein (181aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM1_SYNAS
13_1_20cm_full_scaffold_573_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17963..19435
DNA (1473bp) protein (491aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_20cm_full_scaffold_573_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19353..20213)
DNA (861bp) protein (287aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_573_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(20213..21100)
DNA (888bp) protein (296aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_573_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21102..21308)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_573_24
unknown

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comp(21732..22886)
DNA (1155bp) protein (385aa)

This feature has no annotations

Displaying 24 items

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