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13_1_20cm_full_scaffold_651

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_651_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1..360)
DNA (360bp) protein (120aa)
Putative outer membrane macrolide efflux protein n=2 Tax=Myxococcus RepID=Q1D4Q0_MYXXD alias=16ft_combo_ws3_scaffold_2252_37 id=5224473 tax=16ft_combo_ws3 species=Myxococcus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
outer membrane efflux protein
outer membrane macrolide efflux protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_20cm_full_scaffold_651_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(357..764)
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_full_scaffold_651_3
unknown

Not on your lists

comp(778..1110)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_20cm_full_scaffold_651_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1107..1691)
DNA (585bp) protein (195aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_full_scaffold_651_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1684..3120)
DNA (1437bp) protein (479aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK15_9GAMM
phospholipase D/transphosphatidylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
13_1_20cm_full_scaffold_651_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3117..3707)
DNA (591bp) protein (197aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal dependent phosphohydrolase
13_1_20cm_full_scaffold_651_7
unknown

Not on your lists

4214..5731
DNA (1518bp) protein (506aa)

This feature has no annotations

13_1_20cm_full_scaffold_651_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5582..7195)
DNA (1614bp) protein (538aa)
4-Amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KBR0_CUPNH alias=16ft_combo_ws3_scaffold_1480_5 id=5223931 tax=16ft_combo_ws3 species=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
dolichyl-phosphate-mannose-protein mannosyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_1_20cm_full_scaffold_651_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7380..8678)
DNA (1299bp) protein (433aa)
Sugar phosphate permease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9I8_SINAD
sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:AGA26059.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera ac
13_1_20cm_full_scaffold_651_10
unknown

Not on your lists

8863..9321
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_full_scaffold_651_11
RLO_PLX_64_10, Bacteria

Not on your lists

9318..10442
DNA (1125bp) protein (375aa)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000369095C
WD-40-like beta propeller repeat-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_full_scaffold_651_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

10553..10774
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C77F0
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_20cm_full_scaffold_651_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10777..12249
DNA (1473bp) protein (491aa)
Beta-lactamase domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XGG4_VARPD
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AGU51220.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari
13_1_20cm_full_scaffold_651_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12288..13253
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EC13D
glycoside hydrolase family 29 (alpha-L-fucosidase)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:AHG89157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 14 items

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