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13_1_20cm_full_scaffold_661

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_661_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..892)
DNA (750bp) protein (250aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1J0_STAND
binding-protein-dependent transporter inner membrane component; K02050 NitT/TauT family transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_full_scaffold_661_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(889..1656)
DNA (768bp) protein (256aa)
UPI0003D0488C related cluster n=1 Tax=unknown RepID=UPI0003D0488C
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC transporter-like protein
13_1_20cm_full_scaffold_661_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1653..3335)
DNA (1683bp) protein (561aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PX13_STANL
binding-protein-dependent transporter inner membrane component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_20cm_full_scaffold_661_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3337..3816)
DNA (480bp) protein (160aa)
Aldehyde oxidase small subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN1_THERP
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ETW96851.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
aldehyde oxidase small subunit
13_1_20cm_full_scaffold_661_5
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3813..4706)
DNA (894bp) protein (298aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C783_SPHTD rbh
molybdopterin dehydrogenase FAD-binding protein
13_1_20cm_full_scaffold_661_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4703..5953)
DNA (1251bp) protein (417aa)
N-isopropylammelide isopropylaminohydrolase; K01485 cytosine deaminase [EC:3.5.4.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4)
Putative cytosine deaminase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P964_9FIRM rbh
13_1_20cm_full_scaffold_661_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5959..6693)
DNA (735bp) protein (245aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L543_KORCO
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
branched-chain amino acid ABC transporter ATPase
13_1_20cm_full_scaffold_661_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7408)
DNA (723bp) protein (241aa)
ABC transporter related protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFJ6_ARCPA
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
ABC transporter
13_1_20cm_full_scaffold_661_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7405..8337)
DNA (933bp) protein (311aa)
ABC-type transport system permease protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ILZ2_NATPD
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
abc06p2; branched-chain/neutral amino acids ABC transporter permease
13_1_20cm_full_scaffold_661_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..9217)
DNA (879bp) protein (293aa)
Inner-membrane translocator n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QIA7_DESB2
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
inner-membrane translocator
13_1_20cm_full_scaffold_661_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9222..9857)
DNA (636bp) protein (212aa)
Uncharacterized protein ycgI n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FDJ9_9ALTE
hypothetical protein; K09967 hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
protein of unknown function DUF1989-containing protein
13_1_20cm_full_scaffold_661_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9870..11144)
DNA (1275bp) protein (425aa)
Extracellular ligand-binding receptor n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QIA8_DESB2
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
extracellular ligand-binding receptor
13_1_20cm_full_scaffold_661_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11218..11661)
DNA (444bp) protein (148aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CEL15848.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CEL15848.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00030046D8
short-chain dehydrogenase/reductase SDR
13_1_20cm_full_scaffold_661_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11640..11975)
DNA (336bp) protein (112aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BA46E
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_full_scaffold_661_15
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12155..12817
DNA (663bp) protein (221aa)
GntR family transcriptional regulator n=1 Tax=Thermus islandicus RepID=UPI0003B520FA
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:KFB78395.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Acc
GntR family transcriptional regulator
13_1_20cm_full_scaffold_661_16
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12814..13758
DNA (945bp) protein (315aa)
Cyclase family protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD2_THEM7
Cyclase {ECO:0000313|EMBL:EWT06681.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cyclase family protein
13_1_20cm_full_scaffold_661_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13667..14722)
DNA (1056bp) protein (352aa)
Predicted Zn-dependent peptidases n=1 Tax=uncultured Acidobacteria bacterium HF4000_26D02 RepID=E0XW83_9BACT
ymxG; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ymxG; hypothetical protein
13_1_20cm_full_scaffold_661_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14883..17027)
DNA (2145bp) protein (715aa)
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKK9_9BACT
13_1_20cm_full_scaffold_661_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(17152..17421)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RS15_GEOUR
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpsO; 30S ribosomal protein S15
13_1_20cm_full_scaffold_661_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17538..18326)
DNA (789bp) protein (263aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=GWA2_Rokubacteria_73_35_curated
Riboflavin biosynthesis protein RibF n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JWQ7_DESFR
riboflavin biosynthesis protein RibF
13_1_20cm_full_scaffold_661_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18389..19306)
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI0003618D9C
tRNA pseudouridine synthase B
13_1_20cm_full_scaffold_661_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(19303..20202)
DNA (900bp) protein (300aa)
Exopolyphosphatase-like enzyme n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLA2_9FIRM
exopolyphosphatase-related proteins; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
exopolyphosphatase-related proteins
13_1_20cm_full_scaffold_661_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(20246..20593)
DNA (348bp) protein (116aa)
Ribosome-binding factor A n=2 Tax=Brevibacillus laterosporus RepID=F7TXI5_BRELA
rbfA; putative ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rbfA; ribosome-binding factor A
13_1_20cm_full_scaffold_661_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20593..20883)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKK3_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_full_scaffold_661_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(20905..22296)
DNA (1392bp) protein (464aa)
Translation initiation factor IF-2 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=IF2_CARHZ
infB; translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
infB; translation initiation factor IF-2
Displaying 25 items

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