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13_1_20cm_full_scaffold_662

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_662_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3..1646
DNA (1644bp) protein (548aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD alias=16ft_combo_ws3_scaffold_2718_23 id=5224646 tax=16ft_combo_ws3 species=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_RIF_WS3X_71_46_curated
aerobic-type carbon monoxide dehydrogenase, large subunit-like protein
13_1_20cm_full_scaffold_662_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(1854..2513)
DNA (660bp) protein (220aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
13_1_20cm_full_scaffold_662_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2641..3225)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6I1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37841.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_20cm_full_scaffold_662_4
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3326..3799)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI000348B6E0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII50398.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_1_20cm_full_scaffold_662_5
unknown

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comp(3969..4478)
DNA (510bp) protein (170aa)

This feature has no annotations

13_1_20cm_full_scaffold_662_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4531..4872)
DNA (342bp) protein (114aa)
glucose dehydrogenase n=1 Tax=Janthinobacterium lividum RepID=UPI000287FBF4
Glucose dehydrogenase {ECO:0000313|EMBL:KHA77670.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacteriu
hypothetical protein
13_1_20cm_full_scaffold_662_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4890..5642)
DNA (753bp) protein (251aa)
glucose/sorbosone dehydrogenase n=1 Tax=Janthinobacterium lividum PAMC 25724 RepID=UPI000287FBF4 alias=16ft_combo_ws3_scaffold_8306_8 id=5225724 tax=16ft_combo_ws3 species=Janthinobacterium lividum PAMC 25724 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
glucose/sorbosone dehydrogenase
13_1_20cm_full_scaffold_662_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(5639..6547)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00038107CE
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
protein of unknown function DUF4098
13_1_20cm_full_scaffold_662_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(6567..7175)
DNA (609bp) protein (203aa)
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_20cm_full_scaffold_662_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7172..7702)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T7R7_9GAMM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_662_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7778..8413)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000302BA73
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_full_scaffold_662_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8448..10037
DNA (1590bp) protein (530aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022L4_SOLUE
13_1_20cm_full_scaffold_662_13
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10066..11382
DNA (1317bp) protein (439aa)
Isocitrate lyase {ECO:0000313|EMBL:EKP95339.1}; EC=4.1.3.1 {ECO:0000313|EMBL:EKP95339.1};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Se
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2R7_9FIRM
13_1_20cm_full_scaffold_662_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11479..11748
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_full_scaffold_662_15
unknown

Not on your lists

11858..12328
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_20cm_full_scaffold_662_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12332..13960
DNA (1629bp) protein (543aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACE3_GEMAT rbh
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
twitching motility protein
13_1_20cm_full_scaffold_662_trna_1
unknown

Not on your lists

comp(13982..14053)
DNA (72bp)
transferRNA
Displaying 17 items

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