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13_1_20cm_full_scaffold_712

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_712_1
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..356)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GEV1_9RHOB
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
multidrug efflux pump
13_1_20cm_full_scaffold_712_2
unknown

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comp(792..986)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_full_scaffold_712_3
unknown

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comp(983..1198)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_full_scaffold_712_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1741..2658)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00035E2736 rbh
Haloacid dehalogenase {ECO:0000313|EMBL:KIJ76452.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hydrolase
13_1_20cm_full_scaffold_712_5

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comp(2664..3707)
DNA (1044bp) protein (348aa)
6-phosphogluconate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003827202
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49097.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
6-phosphogluconate dehydrogenase
13_1_20cm_full_scaffold_712_6
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3789..5432)
DNA (1644bp) protein (548aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
glucose-6-phosphate isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366B263
glucose-6-phosphate isomerase
13_1_20cm_full_scaffold_712_7
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5436..6521)
DNA (1086bp) protein (362aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=344747 species="Bacteria; Planctomyc
transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9H5_9PLAN
13_1_20cm_full_scaffold_712_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6525..8090)
DNA (1566bp) protein (522aa)
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B403_9RHIZ rbh
glucose-6-phosphate 1-dehydrogenase
13_1_20cm_full_scaffold_712_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8094..9455)
DNA (1362bp) protein (454aa)
NADH dehydrogenase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEP9_CORCM
yumB1; NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:AFE11156.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Coralloc
13_1_20cm_full_scaffold_712_10
unknown

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comp(9452..9943)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_20cm_full_scaffold_712_11

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10540..10815
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Bacillus RepID=C3BGR7_9BACI
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49073.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Electron transfer DM13
13_1_20cm_full_scaffold_712_12

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11212..11778
DNA (567bp) protein (189aa)
Molybdopterin oxidoreductase Fe4S4 region n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPA9_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48637.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
molybdopterin oxidoreductase Fe4S4 region
13_1_20cm_full_scaffold_712_13

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11887..14466
DNA (2580bp) protein (860aa)
Formate dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPA8_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48636.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
formate dehydrogenase
13_1_20cm_full_scaffold_712_14

Not on your lists

14585..15490
DNA (906bp) protein (302aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEZ7_ANASK
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48635.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
4Fe-4S ferredoxin
13_1_20cm_full_scaffold_712_15

Not on your lists

15648..16313
DNA (666bp) protein (222aa)
Polysulphide reductase, NrfD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPA6_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48634.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
polysulfide reductase NrfD
13_1_20cm_full_scaffold_712_16

Not on your lists

comp(16576..17148)
DNA (573bp) protein (191aa)
Selenocysteine-specific translation elongation factor n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN1_9BACT
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AAY89283.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
selB; selenocysteine-specific translation elongation factor
Displaying 16 items

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