ggKbase home page

13_1_20cm_full_scaffold_7127

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_7127_1
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..325
DNA (324bp) protein (108aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
Quinolinate synthase A n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EKT9_BRASB
nadA; quinolinate synthetase
13_1_20cm_full_scaffold_7127_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

341..1174
DNA (834bp) protein (278aa)
nadC; nicotinate-mononucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4E1_9RHIZ rbh
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EIM31083.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Micr
13_1_20cm_full_scaffold_7127_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1288..1851
DNA (564bp) protein (188aa)
Methyltransferase type 12 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5I6_9CHLR
Methyltransferase type 12 {ECO:0000313|EMBL:EFH80247.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source
Tellurite resistance protein TehB
13_1_20cm_full_scaffold_7127_4
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1929..2726
DNA (798bp) protein (266aa)
Urease accessory protein UreD n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALE4_AZOBR
ureD; Urease accessory protein UreD; K03190 urease accessory protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
ureD; urease accessory protein UreD
13_1_20cm_full_scaffold_7127_5
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2743..3066
DNA (324bp) protein (108aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {
Urease subunit gamma n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALE5_AZOBR
ureA; Urease subunit gamma
13_1_20cm_full_scaffold_7127_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3053..3358
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=883078 species="Bacteria
urease subunit beta n=1 Tax=Methylosarcina fibrata RepID=UPI00037E11D8
ureB; urease subunit beta
13_1_20cm_full_scaffold_7127_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3360..5081
DNA (1722bp) protein (574aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953
Urease subunit alpha n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALE7_AZOBR rbh
ureC; urease, alpha subunit rbh
13_1_20cm_full_scaffold_7127_8
unknown

Not on your lists

comp(5026..5601)
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_20cm_full_scaffold_7127_9
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5646..6374
DNA (729bp) protein (243aa)
Urease accessory protein UreF n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQS2_SORCE
ureF; Urease accessory protein UreF
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385, ECO:0000313|EMBL:CCQ72723.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
13_1_20cm_full_scaffold_7127_10
bacterium YEK0313, Bacteria

Not on your lists

6371..6946
DNA (576bp) protein (192aa)
Urease accessory protein UreG n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALF1_AZOBR
urease accessory protein UreG
Urease accessory protein UreG {ECO:0000313|EMBL:CEJ13360.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
13_1_20cm_full_scaffold_7127_11
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7015..7992
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035C9FDF rbh
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:EMS43657.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" so
Mg2 transporter protein CorA family protein
13_1_20cm_full_scaffold_7127_12
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..8970)
DNA (957bp) protein (319aa)
TPR repeat-containing protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SBZ5_PHAFV
TPR repeat-containing protein {ECO:0000313|EMBL:EPY01588.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeos
TPR repeat-containing protein
13_1_20cm_full_scaffold_7127_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9542..10006)
DNA (465bp) protein (155aa)
Small heat shock protein HSP20-like chaperone n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANJ6_AZOBR
Heat-shock protein {ECO:0000313|EMBL:EWY38180.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiire
hspD2; small heat shock protein; HSP20-like chaperone
13_1_20cm_full_scaffold_7127_14
unknown

Not on your lists

10275..10463
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_full_scaffold_7127_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10519..10752)
DNA (234bp) protein (78aa)
50S ribosomal protein L31 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JKE7_9PROT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; O
rpmE; 50S ribosomal protein L31
13_1_20cm_full_scaffold_7127_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10848..12023)
DNA (1176bp) protein (392aa)
serine--glyoxylate transaminase (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] Tax=RIFCSPHIGHO2_1
serine--glyoxylate transaminase (EC:2.6.1.45)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A611F rbh
13_1_20cm_full_scaffold_7127_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12406..13506
DNA (1101bp) protein (367aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000365CAFE rbh
proS; prolyl-tRNA synthetase
13_1_20cm_full_scaffold_7127_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13532..13672
DNA (141bp) protein (47aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010708};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Prolyl-tRNA synthetase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMD9_9BRAD
13_1_20cm_full_scaffold_7127_19
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13669..14916
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000373B717 rbh
lolC; Lipoprotein ABC transporter; permease component LolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
lolE; lipoprotein-releasing system permease
13_1_20cm_full_scaffold_7127_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14913..15602
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobact
lolD1; Lipoprotein-releasing system ATP-binding protein lolD 1 (EC:3.6.3.-)
Peptide ABC transporter ATPase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AGV3_9PROT
13_1_20cm_full_scaffold_7127_21
unknown

Not on your lists

15635..16225
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_20cm_full_scaffold_7127_22
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16381..17109
DNA (729bp) protein (243aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXQ1_PHAMO
Displaying 22 items

View Taxonomy