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13_1_20cm_full_scaffold_7450

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_7450_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1..840)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PC96_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_full_scaffold_7450_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(896..1261)
DNA (366bp) protein (122aa)
Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ60_9BACT
transcriptional regulators, TraR/DksA family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transcriptional regulators, TraR/DksA family
13_1_20cm_full_scaffold_7450_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1354..1710)
DNA (357bp) protein (119aa)
Ribosomal silencing factor RsfS n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DLB0_DESRL
iojap family protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iojap family protein
13_1_20cm_full_scaffold_7450_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1707..2315)
DNA (609bp) protein (203aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
nicotinate-nucleotide adenylyltransferase n=1 Tax=Thermus islandicus RepID=UPI0003B730A4
13_1_20cm_full_scaffold_7450_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2318..3574)
DNA (1257bp) protein (419aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TE42_DESML
13_1_20cm_full_scaffold_7450_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3582..4193)
DNA (612bp) protein (204aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ56_9BACT
13_1_20cm_full_scaffold_7450_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4648..5670)
DNA (1023bp) protein (341aa)
GTPase Obg n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQC9_DESK7
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GTPase obg
13_1_20cm_full_scaffold_7450_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(5707..5964)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP5_RHOM4
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L27
13_1_20cm_full_scaffold_7450_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(5968..6279)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Wohlfahrtiimonas chitiniclastica SH04 RepID=L8XZH2_9GAMM
50S ribosomal protein L21P; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L21
13_1_20cm_full_scaffold_7450_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6412..7017)
DNA (606bp) protein (202aa)
RNA polymerase sigma factor n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z2C7_9BACT
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
sigW5; ECF subfamily RNA polymerase sigma factor
13_1_20cm_full_scaffold_7450_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7017..7655)
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AGN5_GEOSK
TetR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TetR family transcriptional regulator
13_1_20cm_full_scaffold_7450_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7746..7949)
DNA (204bp) protein (68aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
nuoN; NADH-quinone oxidoreductase membrane subunit N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4A43F
13_1_20cm_full_scaffold_7450_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7943..9139)
DNA (1197bp) protein (399aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] alias=RBG1_31,RBG1_C00001G00031 id=1249589 tax=RBG1 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5)
13_1_20cm_full_scaffold_7450_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9139..10668)
DNA (1530bp) protein (510aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase subunit M n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHF9_9BACT rbh
13_1_20cm_full_scaffold_7450_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10721..12307)
DNA (1587bp) protein (529aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MNE7_9BACT
proton-translocating NADH-quinone oxidoreductase subunit L
Displaying 15 items

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