ggKbase home page

13_1_20cm_full_scaffold_7828

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_7828_1

Not on your lists


2..487
DNA (486bp) protein (162aa)
50S ribosomal protein L16 n=1 Tax=Synechococcus sp. RS9916 RepID=Q05QC0_9SYNE
Marine sediment metagenome DNA, contig: S03H2_S24518 {ECO:0000313|EMBL:GAH83251.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rplP; 50S ribosomal protein L16
13_1_20cm_full_scaffold_7828_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


484..825
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000366A266
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL
50S ribosomal protein L29
13_1_20cm_full_scaffold_7828_3
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


822..1079
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=RS17_CALS8
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicel
13_1_20cm_full_scaffold_7828_4
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1080..1448
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA93_THEPJ
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source
13_1_20cm_full_scaffold_7828_5
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1450..1809
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYH0_9FIRM
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrot
13_1_20cm_full_scaffold_7828_6
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


1806..2375
DNA (570bp) protein (190aa)
50S ribosomal protein L5 n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DRY2_9BACL
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" sou
13_1_20cm_full_scaffold_7828_7
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2394..2576
DNA (183bp) protein (61aa)
30S ribosomal protein S14 type Z n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKH3_DESK7
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomacul
13_1_20cm_full_scaffold_7828_8
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists


2587..2982
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037E552C
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=Caldatribacterium californiense
30S ribosomal protein S8
13_1_20cm_full_scaffold_7828_9
R_NC10_66_22, NC10, Bacteria

Not on your lists


2998..3555
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Desulfurispora thermophila RepID=UPI00037840C5
50S ribosomal protein L6
rplF; 50S ribosomal protein L6 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_20cm_full_scaffold_7828_10
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3559..3927
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA99_THEPJ
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR
13_1_20cm_full_scaffold_7828_11
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3944..4504
DNA (561bp) protein (187aa)
30S ribosomal protein S5 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS5_PELTS
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropioni
13_1_20cm_full_scaffold_7828_12
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists


4507..4689
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Caloramator australicus RC3 RepID=I7KTX8_9CLOT
rpmD; 50S ribosomal protein L30
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_20cm_full_scaffold_7828_13
Anoxybacillus ayderensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4686..5423
DNA (738bp) protein (246aa)
50S ribosomal protein L15 n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8CVZ5_9BACI
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=265546 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxy
13_1_20cm_full_scaffold_7828_14
GWA1_OP11_47_8_very_partial, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists


5427..6740
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY {ECO:0000313|EMBL:KKU80814.1}; TaxID=1618438 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_47_8.;"
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY alias=gwa2_scaffold_993_57 id=5085232 tax=GWA2_OP11 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
preprotein translocase, SecY subunit
13_1_20cm_full_scaffold_7828_15
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6784..7392
DNA (609bp) protein (203aa)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
Adenylate kinase n=1 Tax=Caulobacter sp. (strain K31) RepID=KAD_CAUSK
adenylate kinase
13_1_20cm_full_scaffold_7828_16
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7389..8171
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FR80_9FIRM
13_1_20cm_full_scaffold_7828_17
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8650..8901
DNA (252bp) protein (84aa)
30S ribosomal protein S13 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS13_PELTS
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropion
13_1_20cm_full_scaffold_7828_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


8905..9291
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THB9_9CHLR
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
rpsK; 30S ribosomal protein S11
Displaying 18 items

View Taxonomy