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13_1_20cm_full_scaffold_84

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_84_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..119)
DNA (117bp) protein (39aa)
Transcriptional regulator, AbrB family n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KCP4_PSEFL
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EIK62484.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
AbrB family transcriptional regulator
13_1_20cm_full_scaffold_84_2
unknown

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317..1099
DNA (783bp) protein (261aa)

This feature has no annotations

13_1_20cm_full_scaffold_84_3
unknown

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1110..2531
DNA (1422bp) protein (474aa)
Putative sulfite oxidase (Dehydrogenase) molybdoprotein subunit {ECO:0000313|EMBL:CPR19885.1}; EC=1.8.2.1 {ECO:0000313|EMBL:CPR19885.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteoba
molybdopterin binding oxidoreductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B521EB rbh
twin-arginine translocation pathway signal
13_1_20cm_full_scaffold_84_4
unknown

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2512..3096
DNA (585bp) protein (195aa)
Putative sulfite oxidase (Dehydrogenase) cytochrome subunit {ECO:0000313|EMBL:CPR19889.1}; EC=1.8.2.1 {ECO:0000313|EMBL:CPR19889.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacter
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKD7_AFIFE
putative cytochrome c
13_1_20cm_full_scaffold_84_5
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3621..4598)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DS06_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU81502.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
badF/BadG/BcrA/BcrD ATPase family protein
13_1_20cm_full_scaffold_84_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4595..5779)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DBB3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81503.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
putative galactosamine-6-phosphate isomerase
13_1_20cm_full_scaffold_84_7
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5802..8843)
DNA (3042bp) protein (1014aa)
TonB-dependent receptor n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWK6_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:EGY02353.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
TonB-dependent receptor
13_1_20cm_full_scaffold_84_8
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8861..10162)
DNA (1302bp) protein (434aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1I4_9PROT rbh
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:EGY00625.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillace
tagatose-bisphosphate aldolase
13_1_20cm_full_scaffold_84_9
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10159..11040)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DW23_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
13_1_20cm_full_scaffold_84_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11313..13472
DNA (2160bp) protein (720aa)
Putative alpha-galactosidase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1I2_9PROT rbh
Putative alpha-galactosidase {ECO:0000313|EMBL:EGY00623.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrosp
glycoside hydrolase clan GH-D
13_1_20cm_full_scaffold_84_11
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13472..14257
DNA (786bp) protein (262aa)
DeoR family regulatory protein n=3 Tax=Burkholderia cenocepacia RepID=B4ENL3_BURCJ
hypothetical protein
Transcriptional repressor of aga operon {ECO:0000313|EMBL:CDN65068.1}; TaxID=1055524 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderi
13_1_20cm_full_scaffold_84_12
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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14254..15396
DNA (1143bp) protein (381aa)
Amidohydrolase 2 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VYN0_9SPHN rbh
amidohydrolase 2 Tax=RBG_13_Caldithrix_44_9_curated
Amidohydrolase
13_1_20cm_full_scaffold_84_13
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15608..16177)
DNA (570bp) protein (190aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUW5_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90131.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jan
13_1_20cm_full_scaffold_84_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16920..18236)
DNA (1317bp) protein (439aa)
ATPase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Q6W2G7_RHISN rbh
ATPase
ATPase {ECO:0000313|EMBL:AAQ87050.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (
Displaying 14 items

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