ggKbase home page

13_1_20cm_full_scaffold_859

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_859_1
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

3..155
DNA (153bp) protein (51aa)
para-aminobenzoate synthase component I (EC:4.1.3.27); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] Tax=RBG_13_OP3X_46_9_curated
mta:Moth_2108 aminodeoxychorismate synthase, subunit I (EC:2.6.1.85); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] alias=scaffold_6_71,RBG2_C00006G00071 id=1242104 tax=RBG2 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
para-aminobenzoate synthase subunit I (EC:4.1.3.27)
13_1_20cm_full_scaffold_859_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

161..2395
DNA (2235bp) protein (745aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ4_SOLUE rbh
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ88716.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_1_20cm_full_scaffold_859_3
unknown

Not on your lists

comp(2344..3423)
DNA (1080bp) protein (360aa)

This feature has no annotations

13_1_20cm_full_scaffold_859_4
unknown

Not on your lists

3632..3877
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_full_scaffold_859_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3879..4334
DNA (456bp) protein (152aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ1_SOLUE
helix-hairpin-helix repeat-containing competence protein ComEA
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:ABJ88719.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
13_1_20cm_full_scaffold_859_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4347..4985
DNA (639bp) protein (213aa)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Z3_SPHTD
glutamine amidotransferase of anthranilate synthase
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ACZ39310.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobactera
13_1_20cm_full_scaffold_859_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

4982..5554
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67547.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_20cm_full_scaffold_859_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

5551..6525
DNA (975bp) protein (325aa)
Putative beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (Orf4) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW3_9BACT
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4)
Putative beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (Orf4) {ECO:0000313|EMBL:CBE67546.1}; TaxID=671143 species="Bacteria; candidate division NC10; Can
13_1_20cm_full_scaffold_859_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6736..8511
DNA (1776bp) protein (592aa)
XoxF n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU2_9BACT rbh
Methanol dehydrogenase {ECO:0000313|EMBL:KGM31741.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosu
Pyrrolo-quinoline quinone
13_1_20cm_full_scaffold_859_10
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8643..9470
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367365C
methanol oxidation protein
Putative periplasmic binding protein, involved in methanol oxidation {ECO:0000313|EMBL:CCJ08486.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae;
13_1_20cm_full_scaffold_859_11
unknown

Not on your lists

9516..9992
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_full_scaffold_859_12
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10022..10753
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003679051
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ACK49964.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source
13_1_20cm_full_scaffold_859_13

Not on your lists

10767..11747
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY96670.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
hypothetical protein
13_1_20cm_full_scaffold_859_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11744..12286)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003723505
hypothetical protein Tax=CSP1_5_NC10
Crp/Fnr family transcriptional regulator
13_1_20cm_full_scaffold_859_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12390..13748)
DNA (1359bp) protein (453aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_20cm_full_scaffold_859_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13777..15438)
DNA (1662bp) protein (554aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein oxaA
13_1_20cm_full_scaffold_859_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15480..15707)
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6L1_9PLAN
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_859_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15704..15964)
DNA (261bp) protein (87aa)
Ribonuclease P protein component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP9_GEMAT
Ribonuclease P protein component Tax=GWC2_Gemmatimonadetes_71_10_curated
Ribonuclease P protein component
13_1_20cm_full_scaffold_859_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(16042..16203)
DNA (162bp) protein (54aa)
Ribosomal protein L34 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L34
13_1_20cm_full_scaffold_859_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16330..17712
DNA (1383bp) protein (461aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dnaA; chromosomal replication initiator protein DnaA
13_1_20cm_full_scaffold_859_21
unknown

Not on your lists

17731..17892
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_full_scaffold_859_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17963..19069
DNA (1107bp) protein (369aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT rbh
DNA polymerase III, beta subunit
13_1_20cm_full_scaffold_859_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19208..19846)
DNA (639bp) protein (213aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHG9_THEYD
13_1_20cm_full_scaffold_859_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19866..21425
DNA (1560bp) protein (520aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88134.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_859_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21415..22275)
DNA (861bp) protein (287aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_859_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22275..23195)
DNA (921bp) protein (307aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying 26 items

View Taxonomy