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13_1_20cm_full_scaffold_92

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_92_1
unknown

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comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_20cm_full_scaffold_92_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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222..1262
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A36A4
DNA primase large subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA primase large subunit
13_1_20cm_full_scaffold_92_3
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1259..1885)
DNA (627bp) protein (209aa)
archaetidylinositol phosphate synthase (EC:2.7.8.39)
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ57047.1}; EC=2.7.8.39 {ECO:0000313|EMBL:AIZ57047.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata;
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Euryarchaeota RepID=M9SAG5_9EURY
13_1_20cm_full_scaffold_92_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1876..2397)
DNA (522bp) protein (174aa)
adenylate kinase (EC:2.7.4.3) Tax=RBG_16_Euryarchaeota_68_13_curated
adenylate kinase (EC:2.7.4.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B963D
13_1_20cm_full_scaffold_92_5
unknown

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2473..2889
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_full_scaffold_92_6
unknown

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comp(2891..3589)
DNA (699bp) protein (233aa)

This feature has no annotations

13_1_20cm_full_scaffold_92_7
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(3586..4683)
DNA (1098bp) protein (366aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAI9_ACIB4
oligopeptide/dipeptide ABC transporter, ATP-binding protein
Oligopeptide/dipeptide transporter domain family protein {ECO:0000313|EMBL:EDY34649.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19
13_1_20cm_full_scaffold_92_8
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(4680..6011)
DNA (1332bp) protein (444aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLW2_ACIS0
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
oligopeptide/dipeptide ABC transporter, ATP-binding protein
13_1_20cm_full_scaffold_92_9
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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comp(6028..8415)
DNA (2388bp) protein (796aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJ44_ACIS0 rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB04060.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp
13_1_20cm_full_scaffold_92_10
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(8384..9418)
DNA (1035bp) protein (345aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJU3_ACIS0
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
13_1_20cm_full_scaffold_92_11
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(9519..14369)
DNA (4851bp) protein (1617aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMB3_ACIS0
ABC-type dipeptide transport system, periplasmic component
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AGB04179.1}; Flags: Precursor;; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum
13_1_20cm_full_scaffold_92_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(14559..15347)
DNA (789bp) protein (263aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) Tax=RBG_16_Euryarchaeota_68_13_curated
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T945_9EURY
13_1_20cm_full_scaffold_92_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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15394..16098
DNA (705bp) protein (235aa)
trmL; tRNA (cytidine(34)-2'-O)-methyltransferase (EC:2.1.1.207)
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T502_9EURY
tRNA:Cm32/Um32 methyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_full_scaffold_92_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(16123..16254)
DNA (132bp) protein (44aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59) Tax=RBG_16_Euryarchaeota_68_12_curated
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMA7_METZD
Displaying 14 items

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