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13_1_20cm_full_scaffold_944

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_944_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..1606)
DNA (1605bp) protein (535aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
13_1_20cm_full_scaffold_944_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(1839..2096)
DNA (258bp) protein (86aa)
30S ribosomal protein S15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsO; 30S ribosomal protein S15
13_1_20cm_full_scaffold_944_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2166..3053
DNA (888bp) protein (296aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y3_GEMAT
13_1_20cm_full_scaffold_944_4
unknown

Not on your lists

comp(3045..3461)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_full_scaffold_944_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3445..4806)
DNA (1362bp) protein (454aa)
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B3BB5C
Membrane-associated zinc metalloprotease
13_1_20cm_full_scaffold_944_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4797..5924)
DNA (1128bp) protein (376aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT
1-deoxy-D-xylulose 5-phosphate reductoisomerase
13_1_20cm_full_scaffold_944_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5921..6772)
DNA (852bp) protein (284aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
13_1_20cm_full_scaffold_944_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6774..7514)
DNA (741bp) protein (247aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Isoprenyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT
Undecaprenyl pyrophosphate synthase
13_1_20cm_full_scaffold_944_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7516..8082)
DNA (567bp) protein (189aa)
Ribosome-recycling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z0_GEMAT
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosome-recycling factor
13_1_20cm_full_scaffold_944_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8079..8795)
DNA (717bp) protein (239aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z1_GEMAT
13_1_20cm_full_scaffold_944_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8796..9404)
DNA (609bp) protein (203aa)
elongation factor Ts n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B61283
translation elongation factor Ts; K02357 elongation factor Ts Tax=RBG_16_Gemmatimonadetes_66_8_curated
tsf; elongation factor Ts
13_1_20cm_full_scaffold_944_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(9499..10125)
DNA (627bp) protein (209aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S2
13_1_20cm_full_scaffold_944_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(10122..10355)
DNA (234bp) protein (78aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpsB; 30S ribosomal protein S2
13_1_20cm_full_scaffold_944_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(10513..10920)
DNA (408bp) protein (136aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsI; 30S ribosomal protein S9
13_1_20cm_full_scaffold_944_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(10917..11360)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplM; 50S ribosomal protein L13
13_1_20cm_full_scaffold_944_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11427..11897)
DNA (471bp) protein (157aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin carboxyl carrier protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
biotin carboxyl carrier protein
13_1_20cm_full_scaffold_944_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12067..13335)
DNA (1269bp) protein (423aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
13_1_20cm_full_scaffold_944_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13332..14849)
DNA (1518bp) protein (506aa)
acyl-CoA carboxylase alpha chain (EC:6.4.1.-) Tax=RBG_16_Gemmatimonadetes_66_8_curated
acyl-CoA carboxylase alpha chain (EC:6.4.1.-)
Acyl-CoA carboxylase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT
13_1_20cm_full_scaffold_944_19
unknown

Not on your lists

comp(14919..15188)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_full_scaffold_944_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15819..17342)
DNA (1524bp) protein (508aa)
acyl-CoA carboxylase beta chain (EC:6.4.1.-); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acyl-CoA carboxylase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A400_GEMAT rbh
carboxyl transferase
13_1_20cm_full_scaffold_944_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(17472..19193)
DNA (1722bp) protein (574aa)
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA binding S1 domain protein
13_1_20cm_full_scaffold_944_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19275..20000)
DNA (726bp) protein (242aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cytidylate kinase n=1 Tax=Streptomyces sp. SPB74 RepID=D6M302_9ACTO
Cytidylate kinase
13_1_20cm_full_scaffold_944_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19997..21274)
DNA (1278bp) protein (426aa)
aroA/cmk; 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase (EC:2.5.1.19 2.7.4.14); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonade
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Geobacillus RepID=L8A126_9BACI
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_20cm_full_scaffold_944_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21271..22113)
DNA (843bp) protein (281aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Prephenate dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J1_CONWI
prephenate dehydrogenase
13_1_20cm_full_scaffold_944_25

Not on your lists

comp(22208..24286)
DNA (2079bp) protein (693aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL51735.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_full_scaffold_944_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24431..26137)
DNA (1707bp) protein (569aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NG0_SOLUE
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG93695.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 26 items

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