ggKbase home page

13_1_20cm_full_scaffold_966

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_966_1
unknown

Not on your lists

comp(1..249)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_full_scaffold_966_2

Not on your lists

comp(285..1721)
DNA (1437bp) protein (479aa)
Trehalose synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXW3_CORCM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM63078.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
treT; Trehalose synthase
13_1_20cm_full_scaffold_966_3
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1711..2943)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000361FCBE
glycoside hydrolase
Glycoside hydrolase family protein {ECO:0000313|EMBL:ADI09009.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggen
13_1_20cm_full_scaffold_966_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2957..4408)
DNA (1452bp) protein (484aa)
Putative aldehyde dehydrogenase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9ZHM6_STRSW rbh
aldehyde dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
aldehyde dehydrogenase
13_1_20cm_full_scaffold_966_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4478..5086
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IXU4_FRASU
Uncharacterized protein {ECO:0000313|EMBL:CDH47340.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
13_1_20cm_full_scaffold_966_6
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(5078..6001)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W779_UNCMA
hypothetical protein Tax=GWC2_SYX_53_9_curated
hypothetical protein
13_1_20cm_full_scaffold_966_7
unknown

Not on your lists

6072..6392
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_full_scaffold_966_8

Not on your lists

comp(6389..7012)
DNA (624bp) protein (208aa)
srtA; sortase SrtA (EC:3.4.22.70)
Sortase family protein n=1 Tax=uncultured bacterium RepID=K2CST1_9BACT
Sortase family protein {ECO:0000313|EMBL:EKD88726.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_966_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7118..7465)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CKX9_9LEPT
Putative uncharacterized protein Tax=GWB1_Bdellovibrionales_55_8_curated
13_1_20cm_full_scaffold_966_10
unknown

Not on your lists

comp(7594..7779)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_full_scaffold_966_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7897..9522)
DNA (1626bp) protein (542aa)
AMP-dependent synthetase and ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKS0_9CHLR
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFH86370.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
AMP-dependent synthetase and ligase
13_1_20cm_full_scaffold_966_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9683..9886
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHL6_9BACT
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cold shock-like protein, cspa family
13_1_20cm_full_scaffold_966_13
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9941..10717)
DNA (777bp) protein (259aa)
Methyltransferase type 11 n=2 Tax=Desulfotomaculum RepID=F6B2Q5_DESCC
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEF93884.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivo
13_1_20cm_full_scaffold_966_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10811..11149
DNA (339bp) protein (113aa)
ArsR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI0003703E48
transcriptional regulator, ArsR family; K03892 ArsR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
regulatory protein ArsR
13_1_20cm_full_scaffold_966_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11156..11413
DNA (258bp) protein (86aa)
heat-shock protein HtpX n=1 Tax=Patulibacter americanus RepID=UPI0003B49CDF
protein-tyrosine phosphatase, low molecular weight
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:ADB49023.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.
Displaying 15 items

View Taxonomy