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13_1_20cm_full_scaffold_993

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_993_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..563)
DNA (561bp) protein (187aa)
MFS transporter n=1 Tax=Meiothermus timidus RepID=UPI000372BB42
Major facilitator family transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
major facilitator superfamily protein
13_1_20cm_full_scaffold_993_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(553..2154)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_993_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2145..3383)
DNA (1239bp) protein (413aa)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 alias=16ft_combo_ws3_scaffold_2321_27 id=5224560 tax=16ft_combo_ws3 species=Sorangium cellulosum (strain So ce56) genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-isopropylmalate synthase
13_1_20cm_full_scaffold_993_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3499..4716
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000370FF24
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG91478.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_993_5
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

4761..5048
DNA (288bp) protein (96aa)
Tax=RBG_16_Zixibacteria_53_22_curated
13_1_20cm_full_scaffold_993_6
unknown

Not on your lists

5060..5281
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_full_scaffold_993_7
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5278..5757)
DNA (480bp) protein (160aa)
Peroxiredoxin n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TKC1_9CYAN
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFY82469.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
13_1_20cm_full_scaffold_993_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5769..7349)
DNA (1581bp) protein (527aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R1_GEMAT
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:BAH37571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
13_1_20cm_full_scaffold_993_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7358..8284)
DNA (927bp) protein (309aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R2_GEMAT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AHG89973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_993_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8406..9785)
DNA (1380bp) protein (460aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R3_GEMAT
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_993_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9766..10416)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E19934
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF81779.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="He
TetR family transcriptional regulator
13_1_20cm_full_scaffold_993_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

11026..11628
DNA (603bp) protein (201aa)
N-acetylglutamate synthase (EC:2.3.1.1) Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000368A8B2
GCN5-related N-acetyltransferase
13_1_20cm_full_scaffold_993_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11629..12618)
DNA (990bp) protein (330aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC1_GEMAT
Nucleotidyl transferase
13_1_20cm_full_scaffold_993_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12620..12970)
DNA (351bp) protein (117aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP2_ANADF
cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
13_1_20cm_full_scaffold_993_15
unknown

Not on your lists

comp(12967..13086)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_full_scaffold_993_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13083..13652)
DNA (570bp) protein (190aa)
Putative ferredoxin n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S42_SYMTH
ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:BAD39501.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (s
13_1_20cm_full_scaffold_993_17
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(13652..16597)
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003822517
hypothetical protein Tax=CG_Deferri_01
hypothetical protein
13_1_20cm_full_scaffold_993_18
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16730..17179)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003656678
Uncharacterized protein {ECO:0000313|EMBL:KJF44071.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
13_1_20cm_full_scaffold_993_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17706..17900
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035E6ED2
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC94869.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac
3-oxoacyl-(acyl-carrier-protein) reductase
Displaying 19 items

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