ggKbase home page

13_1_20cm_full_scaffold_2924_14

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(7466..7921)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 152.0
  • Bit_score: 187
  • Evalue 1.10e-44
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 152.0
  • Bit_score: 187
  • Evalue 1.60e-44
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 150.0
  • Bit_score: 144
  • Evalue 3.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 456
ATGTTGGGCAGCAGTTCGGACGTCGAAGACATTGCGCAACAGGTTTTTATTCGAGTCTGGAAAAGCGCGCCTCGTTATGTTCCGCGCGCCAAGTTTACGACATGGCTGTTGAAAATTACGCGCAATCTGGTGTTCAACGAGATGCGCCGAACCAAACGTCGACCGCATGTCCCGCTGCAATCAGAACAAGGTGCGGAGGATCCACCTTTAAAGGATGAGACGAACCCCGCGCCGGACGCATCCCTTCTGGAGTCGGAACTGCAACAAGCCATTGAGGAAGCGATTCAACGGCTGCCAGAGACTCAGCGAATGGCGCTCGTGCTGCGTCGGTACGAGCAGCTCAGTTACGAGCAAATCGCCGATGTCCTGGATCTTTCGGTACCAGCTGTTAAAAGCGTGCTTTTTCGCGCCCGGACAGAACTCCGTGCCCGTCTCAGCAAATATTTTGATTTATAA
PROTEIN sequence
Length: 152
MLGSSSDVEDIAQQVFIRVWKSAPRYVPRAKFTTWLLKITRNLVFNEMRRTKRRPHVPLQSEQGAEDPPLKDETNPAPDASLLESELQQAIEEAIQRLPETQRMALVLRRYEQLSYEQIADVLDLSVPAVKSVLFRARTELRARLSKYFDL*