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13_1_20cm_full_scaffold_2924

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2924_1
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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2..133
DNA (132bp) protein (44aa)
50S ribosomal protein L18 n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y3A3_PARAH
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=GWF2_Bacteroidetes_43_11_curated
50S ribosomal protein L18
13_1_20cm_full_scaffold_2924_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


227..703
DNA (477bp) protein (159aa)
30S ribosomal protein S5 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ0_9BACT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
30S ribosomal protein S5
13_1_20cm_full_scaffold_2924_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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687..1259
DNA (573bp) protein (191aa)
50S ribosomal protein L15 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ1_9BACT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
50S ribosomal protein L15
13_1_20cm_full_scaffold_2924_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1256..2761
DNA (1506bp) protein (502aa)
Protein translocase subunit SecY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ2_9BACT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus
secY; preprotein translocase subunit SecY
13_1_20cm_full_scaffold_2924_5
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2822..3421
DNA (600bp) protein (200aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA58_THEID
adenylate kinase
13_1_20cm_full_scaffold_2924_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3418..4194
DNA (777bp) protein (259aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ3_9BACT
map; methionine aminopeptidase
13_1_20cm_full_scaffold_2924_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4167..4385
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ4_9BACT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
translation initiation factor IF-1
13_1_20cm_full_scaffold_2924_8
unknown

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4382..4558
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_full_scaffold_2924_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4574..4969
DNA (396bp) protein (132aa)
30S ribosomal protein S13 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ5_9BACT
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rpsM; 30S ribosomal protein S13
13_1_20cm_full_scaffold_2924_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


4982..5575
DNA (594bp) protein (198aa)
30S ribosomal protein S11 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ6_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S11
13_1_20cm_full_scaffold_2924_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


5607..6185
DNA (579bp) protein (193aa)
30S ribosomal protein S4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S4
13_1_20cm_full_scaffold_2924_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6254..6487)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D097_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20411.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_2924_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6510..6857)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D098_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20412.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_2924_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7466..7921)
DNA (456bp) protein (152aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_full_scaffold_2924_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8157..9311
DNA (1155bp) protein (385aa)
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR8_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EDY21860.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH or related uncharacterized enzyme
13_1_20cm_full_scaffold_2924_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9349..10182
DNA (834bp) protein (278aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=497964 species=
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR7_9BACT
hypothetical protein
13_1_20cm_full_scaffold_2924_17
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10222..10728)
DNA (507bp) protein (169aa)
Uncharacterized protein n=10 Tax=Burkholderia mallei RepID=C4B184_BURML
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIO79778.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkho
13_1_20cm_full_scaffold_2924_18
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11065..12639
DNA (1575bp) protein (525aa)
single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017452AB
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDD98004.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; envir
single-stranded-DNA-specific exonuclease RecJ
13_1_20cm_full_scaffold_2924_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12636..13199
DNA (564bp) protein (188aa)
ATP-dependent DNA helicase RecG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B7_9BACT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDY19357.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DEAD/DEAH box helicase
Displaying 19 items

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