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13_1_20cm_2_scaffold_1018

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1018_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..131
DNA (129bp) protein (43aa)
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase AAA-2 domain protein
13_1_20cm_2_scaffold_1018_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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128..3124
DNA (2997bp) protein (999aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane protein assembly complex, YaeT protein
13_1_20cm_2_scaffold_1018_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3147..4238
DNA (1092bp) protein (364aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_20cm_2_scaffold_1018_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4339..5511
DNA (1173bp) protein (391aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[
lpxC_fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
13_1_20cm_2_scaffold_1018_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5508..6275
DNA (768bp) protein (256aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
13_1_20cm_2_scaffold_1018_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6272..7258
DNA (987bp) protein (329aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oxidoreductase domain protein
13_1_20cm_2_scaffold_1018_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7255..8403
DNA (1149bp) protein (383aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_1_20cm_2_scaffold_1018_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8400..9026
DNA (627bp) protein (209aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Bacteria RepID=E7C459_9BACT
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_1_20cm_2_scaffold_1018_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9023..10054
DNA (1032bp) protein (344aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_1_20cm_2_scaffold_1018_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10051..11340
DNA (1290bp) protein (430aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate dehydrogenase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X074_ACISM
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_2_scaffold_1018_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11340..11762
DNA (423bp) protein (141aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RLMH_ANADF
hypothetical protein
13_1_20cm_2_scaffold_1018_12
BJP_IG2157_CP_49_12, Bacteria

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11875..12315
DNA (441bp) protein (147aa)
AMMECR1 domain protein alias=gwe2_scaffold_243_47 id=1909066 tax=TA06 species=Syntrophobacter fumaroxidans MPOB genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
AMMECR1-domain-containing protein
Tax=BJP_IG2157_CP_49_12
13_1_20cm_2_scaffold_1018_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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12312..13049
DNA (738bp) protein (246aa)
Methyltransferase type 11 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQ79_9BACT
methyltransferase Tax=GWC2_Gemmatimonadetes_71_10_curated
methyltransferase
13_1_20cm_2_scaffold_1018_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13046..14197
DNA (1152bp) protein (384aa)
UPF0747 protein DealDRAFT_1413 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG04_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_1018_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14157..14399
DNA (243bp) protein (81aa)
UPF0747 protein Cabther_A0081 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFC8_CHLTF
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_1018_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14410..14682
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_1018_17
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..16388
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S9_GEMAT
integral membrane protein MviN; K03980 virulence factor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
hypothetical protein
13_1_20cm_2_scaffold_1018_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16589..17602
DNA (1014bp) protein (338aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
uvrC; UvrABC system protein C
13_1_20cm_2_scaffold_1018_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17609..17866
DNA (258bp) protein (86aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein C
13_1_20cm_2_scaffold_1018_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17863..18744
DNA (882bp) protein (294aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
threonine synthase
Displaying 20 items

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