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13_1_20cm_2_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_102_1
unknown

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_2_scaffold_102_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

401..784
DNA (384bp) protein (128aa)
Chaperonin, 10 kDa n=1 Tax=uncultured marine bacterium Ant4D5 RepID=Q2PXZ9_9BACT
groES; putative 10 kDa chaperonin Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chaperonin Cpn10
13_1_20cm_2_scaffold_102_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

788..1105
DNA (318bp) protein (106aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_102_4
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

1169..2344
DNA (1176bp) protein (392aa)
ATP-dependent DNA helicase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHA8_GLOVI
ATP-dependent DNA helicase {ECO:0000313|EMBL:BAC90570.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).
recQ; ATP-dependent DNA helicase
13_1_20cm_2_scaffold_102_5
bacterium UASB270, Bacteria

Not on your lists

comp(2465..3508)
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK57045.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
13_1_20cm_2_scaffold_102_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3849..5111
DNA (1263bp) protein (421aa)
Serine--glyoxylate transaminase {ECO:0000313|EMBL:ACA20808.1}; EC=2.6.1.45 {ECO:0000313|EMBL:ACA20808.1};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobact
serine--glyoxylate transaminase (EC:2.6.1.45)
Serine--glyoxylate transaminase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UC57_METS4
13_1_20cm_2_scaffold_102_7
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5108..6082
DNA (975bp) protein (325aa)
Malyl-CoA lyase {ECO:0000313|EMBL:EYD78103.1}; EC=4.1.3.24 {ECO:0000313|EMBL:EYD78103.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubel
Malyl-CoA lyase (EC:4.1.3.24)
Malyl-CoA lyase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00038040BE
13_1_20cm_2_scaffold_102_8
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6087..7262
DNA (1176bp) protein (392aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
malate--CoA ligase subunit beta n=1 Tax=Rhodocyclaceae RepID=UPI00037CFC58 rbh
malate--CoA ligase subunit beta
13_1_20cm_2_scaffold_102_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7259..8173
DNA (915bp) protein (305aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKX0_METPP
13_1_20cm_2_scaffold_102_10
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8170..9150
DNA (981bp) protein (327aa)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q608T2_METCA rbh
2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
2-hydroxyacid dehydrogenase
13_1_20cm_2_scaffold_102_11
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9147..11861
DNA (2715bp) protein (905aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
Phosphoenolpyruvate carboxylase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCZ3_METS4
phosphoenolpyruvate carboxylase
13_1_20cm_2_scaffold_102_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11879..13099
DNA (1221bp) protein (407aa)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A933_GEMAT
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AHG90877.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_2_scaffold_102_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13096..15246)
DNA (2151bp) protein (717aa)
prolyl oligopeptidase (EC:3.4.21.26)
prolyl endopeptidase n=1 Tax=Chlorogloeopsis RepID=UPI000300DF20
Prolyl endopeptidase {ECO:0000313|EMBL:KIF32544.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_20cm_2_scaffold_102_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15527..17032
DNA (1506bp) protein (502aa)
cafA; ribonuclease G (EC:3.1.-.-); K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT
13_1_20cm_2_scaffold_102_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


17135..17455
DNA (321bp) protein (107aa)
50S ribosomal protein L21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L21
13_1_20cm_2_scaffold_102_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


17464..17736
DNA (273bp) protein (91aa)
50S ribosomal protein L27 n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9Y0C5_STAC7
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
LSU ribosomal protein L27P
13_1_20cm_2_scaffold_102_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17733..18941)
DNA (1209bp) protein (403aa)
Imidazolonepropionase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3F7_9PROT rbh
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase
13_1_20cm_2_scaffold_102_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18938..20377)
DNA (1440bp) protein (480aa)
amidohydrolase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5895F
Amidohydrolase {ECO:0000313|EMBL:AHG90870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase
13_1_20cm_2_scaffold_102_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20398..22482)
DNA (2085bp) protein (695aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
M16 family peptidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0J6_CORCM
M16 family peptidase
13_1_20cm_2_scaffold_102_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22512..23846)
DNA (1335bp) protein (445aa)
Peptidase S16B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN4_GEMAT
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase S16B family protein
13_1_20cm_2_scaffold_102_21
unknown

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comp(23849..24613)
DNA (765bp) protein (255aa)

This feature has no annotations

13_1_20cm_2_scaffold_102_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24582..25445)
DNA (864bp) protein (288aa)
Amidohydrolase 2 n=1 Tax=mine drainage metagenome RepID=T1BXN0_9ZZZZ
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amidohydrolase 2
13_1_20cm_2_scaffold_102_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25466..26323)
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_102_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26320..27009)
DNA (690bp) protein (230aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
13_1_20cm_2_scaffold_102_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(27006..28130)
DNA (1125bp) protein (375aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Benzoyl-CoA oxygenase component B n=1 Tax=mine drainage metagenome RepID=E6Q409_9ZZZZ
benzoyl-CoA oxygenase subunit beta
13_1_20cm_2_scaffold_102_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28130..28885)
DNA (756bp) protein (252aa)
enoyl-CoA hydratase n=1 Tax=Duganella zoogloeoides RepID=UPI00037ABE1D
enoyl-CoA hydratase/isomerase Tax=RBG_16_Gemmatimonadetes_66_8_curated
phenylacetate degradation, enoyl-CoA hydratase paaB
13_1_20cm_2_scaffold_102_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(28885..30069)
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RI8_SYMTH
13_1_20cm_2_scaffold_102_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30066..31493)
DNA (1428bp) protein (476aa)
Aldehyde Dehydrogenase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
NAD-dependent aldehyde dehydrogenase
13_1_20cm_2_scaffold_102_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(31490..32305)
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
13_1_20cm_2_scaffold_102_30
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(32312..32905)
DNA (594bp) protein (198aa)
TetR-family transcriptional regulator n=1 Tax=uncultured bacterium RepID=Q565X7_9BACT
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TetR family transcriptional regulator
Displaying items 1-30 of 50 in total

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