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13_1_20cm_2_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_113_1
unknown

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_2
unknown

Not on your lists

comp(494..916)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1082..2308)
DNA (1227bp) protein (409aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB1_NITGG
acyl-CoA dehydrogenase Tax=RBG_16_Archaea_50_20_curated
putative acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_113_4
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2713..3600
DNA (888bp) protein (296aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=GWB2_Deltaproteobacteria_55_19_curated
PfkB domain protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REX0_METP4
PfkB domain-containing protein
13_1_20cm_2_scaffold_113_5
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3603..4430
DNA (828bp) protein (276aa)
Transketolase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XCS1_THEPJ
Transketolase domain protein {ECO:0000313|EMBL:ADG83597.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR)
transketolase
13_1_20cm_2_scaffold_113_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4480..5421
DNA (942bp) protein (314aa)
Transketolase, C-terminal section (EC:2.2.1.1) Tax=GWF2_RBX1_38_17_curated
transketolase, alpha subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML5_NITGG
13_1_20cm_2_scaffold_113_7
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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5429..6130
DNA (702bp) protein (234aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcac
transaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTU6_METIM
13_1_20cm_2_scaffold_113_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6285..7892
DNA (1608bp) protein (536aa)
pyrG; CTP synthetase (EC:6.3.4.2) Tax=RBG_13_Bathyarchaeota_38_9_curated
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICB7_ACIB4
13_1_20cm_2_scaffold_113_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

7974..8477
DNA (504bp) protein (168aa)
Pyridoxin-like ECF transporter substrate-specific component n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIR2_THEBM
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
pyridoxin-like ECF transporter substrate-specific component
13_1_20cm_2_scaffold_113_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8509..8748)
DNA (240bp) protein (80aa)
Putative snRNP Sm-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID4_NITGG
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative snRNP Sm-like protein
13_1_20cm_2_scaffold_113_11
unknown

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9088..9306
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_12
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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9625..10422
DNA (798bp) protein (266aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeot
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein
13_1_20cm_2_scaffold_113_13
unknown

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10897..11265
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_14
Emiliania huxleyi virus 203, Coccolithovirus, Viruses

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comp(11688..13055)
DNA (1368bp) protein (456aa)
infB; translation initiation factor IF-2 (EC:3.6.5.3)
Putative uncharacterized protein n=4 Tax=unclassified Coccolithovirus RepID=G3GPU6_9PHYC
Putative uncharacterized protein {ECO:0000313|EMBL:AEO98174.1}; TaxID=181212 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Coccolithovirus; unclassified Coccolithovirus.;" source="Em
13_1_20cm_2_scaffold_113_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

13595..14587
DNA (993bp) protein (331aa)
DNA repair and recombination protein RadA n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU1_9CREN
DNA recombination and repair protein, RecA-like protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA repair protein RadA
13_1_20cm_2_scaffold_113_16
unknown

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14749..15042
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(14996..15421)
DNA (426bp) protein (142aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_113_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15512..16051
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003636EFA
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
CBS-domain-containing protein
13_1_20cm_2_scaffold_113_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

15990..17381
DNA (1392bp) protein (464aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TTM2_9EURY
13_1_20cm_2_scaffold_113_20
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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17399..17878
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP39_STAMF
Uncharacterized protein {ECO:0000313|EMBL:ABN70399.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus mar
hypothetical protein
13_1_20cm_2_scaffold_113_21
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

17872..18498
DNA (627bp) protein (209aa)
Protein MFS40622_1352 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S5B5_METSF
Protein MFS40622_1352 {ECO:0000256|HAMAP-Rule:MF_00645}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldoc
AMMECR1 domain protein
13_1_20cm_2_scaffold_113_22
unknown

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18579..19073
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_23

Not on your lists

19176..19952
DNA (777bp) protein (259aa)
tRNA methyltransferase complex GCD14 subunit (TRM61, GCD14) {ECO:0000313|EMBL:AIF16338.1}; EC=2.1.1.219 {ECO:0000313|EMBL:AIF16338.1};; TaxID=1456268 species="Archaea; Thaumarchaeota; environmental sa
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036D57CD
tRNA methyltransferase complex GCD14 subunit
13_1_20cm_2_scaffold_113_24
unknown

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19963..20241
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_2_scaffold_113_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(20301..21704)
DNA (1404bp) protein (468aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13 5.4.2.8); K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Thaumarchaeota_49_8_curat
mpg1; putative mannose-1-phosphate guanyltransferase (EC:2.7.7.13)
Glucose-1-phosphate nucleotidyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMX4_CLOPA
13_1_20cm_2_scaffold_113_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21965..22336)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036E1D68
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AIC15649.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
Transcriptional regulator, PadR family
13_1_20cm_2_scaffold_113_27
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22594..23088)
DNA (495bp) protein (165aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FNF5_METHJ
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABD42883.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospi
response regulator receiver domain-containing protein
13_1_20cm_2_scaffold_113_28
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(23096..26497)
DNA (3402bp) protein (1134aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source=
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QT02_NOSS7
methylase of chemotaxis methyl-accepting protein
13_1_20cm_2_scaffold_113_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26625..27446
DNA (822bp) protein (274aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85252.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_20cm_2_scaffold_113_30
unknown

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27566..27877
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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