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13_1_20cm_2_scaffold_1136

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1136_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..369)
DNA (369bp) protein (123aa)
cheA; chemotaxis protein CheA (EC:2.7.13.3); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CheA signal transduction histidine kinases n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMP8_9FIRM
chemotaxis protein
13_1_20cm_2_scaffold_1136_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(373..735)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY homolog n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A887_GEMAT
chemotaxis protein CheY homolog; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RBG_16_Gemmatimonadetes_66_8_curated
chemotaxis protein CheY homolog
13_1_20cm_2_scaffold_1136_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(732..1052)
DNA (321bp) protein (107aa)
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_1136_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1163..2200)
DNA (1038bp) protein (346aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT
pseudouridine synthase, RluA family
13_1_20cm_2_scaffold_1136_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2197..2706)
DNA (510bp) protein (170aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lipoprotein signal peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A883_GEMAT
Lipoprotein signal peptidase
13_1_20cm_2_scaffold_1136_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2690..3103)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A882_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_1136_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3103..6261)
DNA (3159bp) protein (1053aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A881_GEMAT
13_1_20cm_2_scaffold_1136_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6261..7070)
DNA (810bp) protein (270aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A880_GEMAT
13_1_20cm_2_scaffold_1136_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7067..7561)
DNA (495bp) protein (165aa)
Septum site-determining protein DivIVA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A879_GEMAT
divIVA; septum site-determining protein DivIVA; K04074 cell division initiation protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UPF0001
13_1_20cm_2_scaffold_1136_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7558..8247)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A878_GEMAT
alanine racemase domain-containing protein; K06997 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UPF0001
13_1_20cm_2_scaffold_1136_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8330..9139)
DNA (810bp) protein (270aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A876_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Conserved hypothetical protein CHP00159
13_1_20cm_2_scaffold_1136_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9136..10299)
DNA (1164bp) protein (388aa)
Dihydropteroate synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCU3_ANADF
dihydropteroate synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dihydropteroate synthase
13_1_20cm_2_scaffold_1136_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10296..11453)
DNA (1158bp) protein (386aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNL7_AZOSU
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG93525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_1136_14
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(11450..12526)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GDM1_DESGI
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_13_RIF03_48_7_curated
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_1136_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12523..13131)
DNA (609bp) protein (203aa)
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Actinobacteria_67_10_curated
ABC transporter related protein
ABC transporter related alias=RBG1_1666,RBG1_C00001G01666 id=1251224 tax=RBG1 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
13_1_20cm_2_scaffold_1136_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13172..14434)
DNA (1263bp) protein (421aa)
Secretion protein HlyD n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHN3_9BACT
RND family efflux pump membrane fusion protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
efflux transporter, RND family, MFP subunit
13_1_20cm_2_scaffold_1136_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14499..16484)
DNA (1986bp) protein (662aa)
ftsH; ATP-dependent protease FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A875_GEMAT
peptidase M41 FtsH domain protein
13_1_20cm_2_scaffold_1136_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16485..17042)
DNA (558bp) protein (186aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAH38434.1}; EC=2.4.2.8 {ECO:0000313|EMBL:BAH38434.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A874_GEMAT
13_1_20cm_2_scaffold_1136_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17002..18360)
DNA (1359bp) protein (453aa)
cell cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR63_SINAD
tRNA(Ile)-lysidine synthase
13_1_20cm_2_scaffold_1136_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18520..18912
DNA (393bp) protein (131aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DN06_DESRL
flavin reductase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
flavin reductase domain-containing protein
13_1_20cm_2_scaffold_1136_21
unknown

Not on your lists

comp(18970..19512)
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_20cm_2_scaffold_1136_22
RLO_PLX_64_10, Bacteria

Not on your lists

19597..20070
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XNK7_HIRBI
ketosteroid isomerase-like protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_2_scaffold_1136_23
unknown

Not on your lists

comp(20157..20369)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 23 items

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