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13_1_20cm_2_scaffold_12001

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_12001_1
unknown

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682..909
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_2_scaffold_12001_2
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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984..1499
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y543_SORCE
NTP pyrophosphohydrolase {ECO:0000313|EMBL:AKH68564.1}; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter
NUDIX hydrolase
13_1_20cm_2_scaffold_12001_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1496..2443)
DNA (948bp) protein (316aa)
ATP pyrophosphatase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZK02_THELI
n-type ATP pyrophosphatase superfamily protein Tax=RBG_16_Archaea_50_20_curated
ATP pyrophosphatase
13_1_20cm_2_scaffold_12001_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(2449..3534)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZEJ5_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_12001_5
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(3667..4398)
DNA (732bp) protein (244aa)
DNA polymerase beta domain protein region n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ED67_PYRF1
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEM39745.1}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus f
DNA polymerase beta domain containing protein
13_1_20cm_2_scaffold_12001_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4395..5168)
DNA (774bp) protein (258aa)
F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
cofE-1; F420-0:gamma-L-glutamate ligase (EC:6.3.2.-)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036E5F94
13_1_20cm_2_scaffold_12001_7
RBG_16_Archaea_50_20_curated, Archaea

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5391..5630
DNA (240bp) protein (80aa)
TRAM domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBW5_NITGG
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein, contains TRAM domain
13_1_20cm_2_scaffold_12001_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5734..6447
DNA (714bp) protein (238aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14318.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_20cm_2_scaffold_12001_9
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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6460..7623
DNA (1164bp) protein (388aa)
Geranylgeranyl reductase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY40_THEPD
Geranylgeranyl reductase {ECO:0000313|EMBL:ABL78120.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain
geranylgeranyl reductase
13_1_20cm_2_scaffold_12001_10
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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7636..8016
DNA (381bp) protein (127aa)
geranylgeranylglyceryl phosphate synthase-like protein; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000370362D
(S)-3-O-geranylgeranylglyceryl phosphate synthase
13_1_20cm_2_scaffold_12001_11
RBG_16_Archaea_50_20_curated, Archaea

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7973..8302
DNA (330bp) protein (110aa)
geranylgeranylglyceryl phosphate synthase-like protein; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Archaea_50_20_curated
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=GGGPS_PYRAB
geranylgeranylglyceryl phosphate synthase-like protein
13_1_20cm_2_scaffold_12001_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8313..10145
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EAY7_9EURY
hypothetical protein; K08979 putative membrane protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_12001_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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10151..11215
DNA (1065bp) protein (355aa)
GldA; glycerol dehydrogenase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261] Tax=RBG_16_Bathyarchaeota_48_13_curated
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=G1PDH_METKA rbh
GldA; glycerol dehydrogenase
13_1_20cm_2_scaffold_12001_14
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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11202..12188
DNA (987bp) protein (329aa)
diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_13_Bathyarchaeota_52_12_curated
diphosphomevalonate decarboxylase (EC:4.1.1.33)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
13_1_20cm_2_scaffold_12001_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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12229..13680
DNA (1452bp) protein (484aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_13_Bathyarchaeota_38_9_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZN53_THELI
13_1_20cm_2_scaffold_12001_16
unknown

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comp(13997..14611)
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_20cm_2_scaffold_12001_17
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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15193..15756
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036E2B83
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AHF80195.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus p
Transcriptional regulator, ArsR family
Displaying 17 items

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