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13_1_20cm_2_scaffold_1202

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1202_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..684
DNA (684bp) protein (228aa)
ABC efflux transporter, FtsX-domain permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILC9_NITGG
ABC efflux transporter, FtsX-domain permease protein {ECO:0000313|EMBL:AFU59432.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphae
ABC efflux transporter, FtsX-domain permease
13_1_20cm_2_scaffold_1202_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(815..1378)
DNA (564bp) protein (188aa)
Ammonia monooxygenase/methane monooxygenase, subunit C n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMG9_NITGG rbh
Ammonia monooxygenase/methane monooxygenase, subunit C {ECO:0000313|EMBL:AIF83173.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososph
Ammonia monooxygenase/methane monooxygenase, subunit C
13_1_20cm_2_scaffold_1202_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1625..2386)
DNA (762bp) protein (254aa)
Putative metallophosphoesterase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILD3_NITGG rbh
Putative metallophosphoesterase {ECO:0000313|EMBL:AFU59437.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
metallophosphoesterase
13_1_20cm_2_scaffold_1202_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2522..3037
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJP1_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59438.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_1202_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3071..4096
DNA (1026bp) protein (342aa)
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:AFU59439.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU59439.1};; EC=1.1.1.41 {ECO:0000313|EMBL:AFU59439.1};; TaxID=1237085 species="Archaea; Thaumarch
icd; isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.- 1.1.1.41) rbh
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI6_NITGG rbh
13_1_20cm_2_scaffold_1202_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4097..4609)
DNA (513bp) protein (171aa)
Putative N6 adenine-specific DNA methyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL1_NITGG
Putative N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:AFU59440.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
N6 adenine-specific DNA methyltransferase
13_1_20cm_2_scaffold_1202_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4590..5285)
DNA (696bp) protein (232aa)
Putative ribosomal RNA small subunit methyltransferase A {ECO:0000313|EMBL:AFU59441.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFU59441.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitr
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.-)
Putative ribosomal RNA small subunit methyltransferase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG2_NITGG rbh
13_1_20cm_2_scaffold_1202_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5322..5840)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILD6_NITGG rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59442.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_1202_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5968..6300)
DNA (333bp) protein (111aa)
Putative RNA polymerase Rpb4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJP5_NITGG
Putative RNA polymerase Rpb4 {ECO:0000313|EMBL:AFU59443.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
rpb4; RNA polymerase Rpb4
13_1_20cm_2_scaffold_1202_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6297..6617)
DNA (321bp) protein (107aa)
50S ribosomal protein L21e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0INI7_NITGG
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nit
rpl21e; 50S ribosomal protein L21e
13_1_20cm_2_scaffold_1202_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6650..7633)
DNA (984bp) protein (328aa)
DNA repair and recombination protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL5_NITGG rbh
DNA repair and recombination protein RadA {ECO:0000313|EMBL:AIF83164.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
DNA repair and recombination protein RadA
13_1_20cm_2_scaffold_1202_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7747..8304
DNA (558bp) protein (186aa)
Ammonia monooxygenase subunit B {ECO:0000313|EMBL:AFU59446.1}; EC=1.14.13.25 {ECO:0000313|EMBL:AFU59446.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitroso
amoB; ammonia monooxygenase subunit B (EC:1.14.13.25)
Ammonia monooxygenase subunit B n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IDG6_NITGG rbh
13_1_20cm_2_scaffold_1202_13

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comp(8358..9140)
DNA (783bp) protein (261aa)
cbiHC; precorrin-3B methylase (EC:2.1.1.- 5.4.1.-)
Precorrin-3B methylase n=1 Tax=uncultured archaeon RepID=I3RKW4_9ARCH rbh
Precorrin-3B methylase {ECO:0000313|EMBL:AFK24974.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_20cm_2_scaffold_1202_14

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comp(9173..10585)
DNA (1413bp) protein (471aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
thrA; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=uncultured archaeon RepID=I3RKW3_9ARCH rbh
13_1_20cm_2_scaffold_1202_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10587..11339)
DNA (753bp) protein (251aa)
DNA polymerase sliding clamp n=1 Tax=uncultured archaeon RepID=I3RKW2_9ARCH rbh
DNA polymerase sliding clamp {ECO:0000256|RuleBase:RU003673}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
pcn; DNA polymerase sliding clamp
13_1_20cm_2_scaffold_1202_16
unknown

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11458..11940
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_2_scaffold_1202_17

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comp(11905..12183)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKW0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24970.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpoL; DNA-directed RNA polymerase subunit L
13_1_20cm_2_scaffold_1202_18

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12236..12751
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKV9_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK24969.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
13_1_20cm_2_scaffold_1202_19

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12812..13882
DNA (1071bp) protein (357aa)
Radical SAM domain-containing protein n=1 Tax=uncultured archaeon RepID=I3RKV8_9ARCH rbh
Radical SAM domain-containing protein {ECO:0000313|EMBL:AFK24968.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
radical SAM domain-containing protein rbh
13_1_20cm_2_scaffold_1202_trna_1
unknown

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13918..13991
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_1202_20
unknown

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14179..14859
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_20cm_2_scaffold_1202_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15570..16079)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000375BB7F
Nitroreductase {ECO:0000313|EMBL:AIF84056.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaer
nitroreductase
13_1_20cm_2_scaffold_1202_22

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comp(16165..16815)
DNA (651bp) protein (217aa)
amoA; ammonia monooxygenase subunit A (EC:1.14.99.39)
Ammonia monooxygenase (Fragment) n=1 Tax=uncultured archaeon RepID=G8GSJ3_9ARCH rbh
Ammonia monooxygenase {ECO:0000313|EMBL:AET36368.1}; Flags: Fragment;; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_20cm_2_scaffold_1202_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16991..17293)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKP3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF83037.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
hypothetical protein
13_1_20cm_2_scaffold_1202_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17391..18575)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ0_NITGG rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59459.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_1202_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18661..18828
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP4_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59460.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_1202_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18942..19136
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDI1_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59461.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
Displaying 27 items

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