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13_1_20cm_2_scaffold_1240

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1240_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3..3812
DNA (3810bp) protein (1270aa)
BNR/Asp-box repeat domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGR0_ACIB4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1240_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3813..5453
DNA (1641bp) protein (547aa)
KaiC domain protein, PAE1156 family n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0A8J0_CALLD
RecA family AAA ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
KaiC domain-containing protein
13_1_20cm_2_scaffold_1240_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5401..11412
DNA (6012bp) protein (2004aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
MshQ-like protein alias=RBG9_59_25,RBG9_C00059G00025 id=1246947 tax=RBG9 species=Marinobacter adhaerens genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
putative cell wall surface anchor family protein
13_1_20cm_2_scaffold_1240_4
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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11803..12423
DNA (621bp) protein (207aa)
Tax=RBG_13_Euryarchaeota_61_15_curated
13_1_20cm_2_scaffold_1240_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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12420..12884
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003601847
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_2_scaffold_1240_6
unknown

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comp(12876..13139)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_1240_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(13136..13627)
DNA (492bp) protein (164aa)
Helix-turn-helix domain protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8S4_9EURY
helix-turn-helix domain protein Tax=RBG_16_Euryarchaeota_67_27_curated
helix-turn-helix domain protein
13_1_20cm_2_scaffold_1240_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13704..14912
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036840DE rbh
proteasome-activating nucleotidase Tax=RBG_16_Euryarchaeota_68_13_curated
proteasome-activating nucleotidase
13_1_20cm_2_scaffold_1240_9
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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comp(14978..15157)
DNA (180bp) protein (60aa)
hypothetical protein Tax=RBG_13_Euryarchaeota_61_15_curated
13_1_20cm_2_scaffold_1240_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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15274..16155
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003751982
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Euryarchaeota_68_12_curated
peptidylprolyl isomerase FKBP-type
13_1_20cm_2_scaffold_1240_11
unknown

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16922..17491
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_20cm_2_scaffold_1240_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(17422..18726)
DNA (1305bp) protein (435aa)
Protoporphyrinogen oxidase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHE2_METFS rbh
amine oxidase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
protoporphyrinogen oxidase
13_1_20cm_2_scaffold_1240_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(18766..19917)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7L6_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1240_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(19923..21221)
DNA (1299bp) protein (433aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RBG_16_Euryarchaeota_68_12_curated
Phosphomethylpyrimidine kinase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHE3_PYRYC
phosphomethylpyrimidine kinase
13_1_20cm_2_scaffold_1240_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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21308..21685
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T901_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1240_16
unknown

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21780..22331
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_2_scaffold_1240_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(22352..22903)
DNA (552bp) protein (184aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037365A0
LigT; 2'-5' RNA ligase
13_1_20cm_2_scaffold_1240_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(22908..23297)
DNA (390bp) protein (130aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_1240_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(23308..23991)
DNA (684bp) protein (228aa)
putative uridylate kinase (EC:2.7.4.22)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369E1FA
putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_1240_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

24111..24320
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_1240_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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24397..25578
DNA (1182bp) protein (394aa)
Peptide chain release factor subunit 1 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGK7_ACIB4
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 Tax=RBG_16_Euryarchaeota_68_12_curated
peptide chain release factor 1
13_1_20cm_2_scaffold_1240_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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25580..27301
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366B0B8 rbh
Arginyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_68_12_curated
Arginyl-tRNA synthetase
13_1_20cm_2_scaffold_1240_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(27313..27564)
DNA (252bp) protein (84aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 23 items

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