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13_1_20cm_2_scaffold_12482

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_12482_1
unknown

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1..435
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_2_scaffold_12482_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(500..1336)
DNA (837bp) protein (279aa)
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_20cm_2_scaffold_12482_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1516..2832)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09CF3_STIAD
Ig-like domain protein {ECO:0000313|EMBL:ADO69601.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stig
ig-like domain-containing protein
13_1_20cm_2_scaffold_12482_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2772..3515)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09CF3_STIAD
Ig-like domain protein {ECO:0000313|EMBL:ADO69601.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stig
ig-like domain-containing protein
13_1_20cm_2_scaffold_12482_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3739..4188)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6BBP2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN33275.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distaso
sh3 type 3 domain-containing protein
13_1_20cm_2_scaffold_12482_6
Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(4545..5126)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FQN8_DEHSB
hypothetical protein
13_1_20cm_2_scaffold_12482_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5123..6385)
DNA (1263bp) protein (421aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine hydroxymethyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=GLYA_ANAD2
Serine hydroxymethyltransferase
13_1_20cm_2_scaffold_12482_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6382..6819)
DNA (438bp) protein (146aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DBI6_9BACT
13_1_20cm_2_scaffold_12482_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(6812..7024)
DNA (213bp) protein (71aa)
Glu/Leu/Phe/Val dehydrogenase; K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
leucine dehydrogenase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002F88C32
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_2_scaffold_12482_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7021..7875)
DNA (855bp) protein (285aa)
leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_2_scaffold_12482_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7820..8182)
DNA (363bp) protein (121aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH38334.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAH38334.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;"
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
13_1_20cm_2_scaffold_12482_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8173..9657)
DNA (1485bp) protein (495aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AIP6_FLELS
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_2_scaffold_12482_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9654..10517)
DNA (864bp) protein (288aa)
Abortive infection protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6K5_TERSS
Abortive infection protein {ECO:0000313|EMBL:ADV82744.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC
abortive infection protein
13_1_20cm_2_scaffold_12482_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10517..11140)
DNA (624bp) protein (208aa)
BioY protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NR36_MARHT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
BioY protein
13_1_20cm_2_scaffold_12482_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11141..12307)
DNA (1167bp) protein (389aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-CoA C-acetyltransferase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MRQ1_9BACT
acetyl-CoA acetyltransferase
13_1_20cm_2_scaffold_12482_16
unknown

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comp(12396..12488)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 16 items

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