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13_1_20cm_2_scaffold_1274

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1274_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(135..467)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
thioredoxin
13_1_20cm_2_scaffold_1274_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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508..912
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_1_20cm_2_scaffold_1274_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1438..2163
DNA (726bp) protein (242aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_20cm_2_scaffold_1274_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2176..3840
DNA (1665bp) protein (555aa)
Hpt domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_1274_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3923..4876
DNA (954bp) protein (318aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
hypothetical membrane protein; K07027 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_20cm_2_scaffold_1274_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4873..5766
DNA (894bp) protein (298aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ISPE_SOLUE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_1_20cm_2_scaffold_1274_7
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(5804..6817)
DNA (1014bp) protein (338aa)
Ig domain protein group 2 domain protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PM33_MEIRD
Ig domain-containing protein
Tax=CG_Bacteroid_01
13_1_20cm_2_scaffold_1274_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(6869..7984)
DNA (1116bp) protein (372aa)
OmpA family protein n=1 Tax=Leptospira santarosai str. CBC523 RepID=M6RXA4_9LEPT
peptidoglycan-associated lipoprotein Tax=RBG_16_RIF_CHLX_70_13_curated
OmpA/MotB domain-containing protein
13_1_20cm_2_scaffold_1274_9
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8044..10518)
DNA (2475bp) protein (825aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_20cm_2_scaffold_1274_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(10566..12287)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_1_20cm_2_scaffold_1274_11
CG_Elusi_04, Elusimicrobia, Bacteria

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comp(12284..12976)
DNA (693bp) protein (231aa)
3-oxoadipate CoA-transferase subunit B protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U689_9DELT
3-oxoacid CoA-transferase Tax=CG_Elusi_04
3-oxoadipate CoA-transferase
13_1_20cm_2_scaffold_1274_12
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12999..13316)
DNA (318bp) protein (106aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=GWC2_Elusimicrobia_65_9_curated
3-oxoadipate:succinyl-CoA transferase subunit A n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6X5_MYXSD
3-oxoadipate:succinyl-CoA transferase subunit A
13_1_20cm_2_scaffold_1274_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13834..15165)
DNA (1332bp) protein (444aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S481_9DELT
4-aminobutyrate aminotransferase
13_1_20cm_2_scaffold_1274_14
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(15162..16790)
DNA (1629bp) protein (543aa)
aldH; aldehyde dehydrogenase (EC:1.2.1.-); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
aldH; aldehyde dehydrogenase (EC:1.2.1.-)
Aldehyde dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SL59_9ZZZZ
13_1_20cm_2_scaffold_1274_15
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16787..18142)
DNA (1356bp) protein (452aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PLU5_9DELT
class III aminotransferase Tax=GWC2_Elusimicrobia_65_9_curated
class III aminotransferase
13_1_20cm_2_scaffold_1274_trna_1
unknown

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18222..18292
DNA (71bp)
transferRNA
Displaying 16 items

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