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13_1_20cm_2_scaffold_1293

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1293_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..800
DNA (798bp) protein (266aa)
Putative anti-sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ4_GEMAT
FecR protein {ECO:0000313|EMBL:AHG89922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
FecR protein
13_1_20cm_2_scaffold_1293_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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841..4287
DNA (3447bp) protein (1149aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036D12FC
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52058.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
13_1_20cm_2_scaffold_1293_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4306..5793
DNA (1488bp) protein (496aa)
RagB/SusD domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDT3_9BACT rbh
RagB/SusD domain protein {ECO:0000313|EMBL:CCH52057.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RagB/SusD domain-containing protein
13_1_20cm_2_scaffold_1293_4
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5793..7244
DNA (1452bp) protein (484aa)
Glycoside hydrolase family 30 n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKD3_9BURK rbh
Glycoside hydrolase family 30 {ECO:0000313|EMBL:ELX11876.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthi
glycoside hydrolase family protein
13_1_20cm_2_scaffold_1293_5
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7419..8081
DNA (663bp) protein (221aa)
Uncharacterized protein (Fragment) n=1 Tax=Ficedula albicollis RepID=U3K7L7_FICAL
Uncharacterized protein {ECO:0000313|EMBL:KIH97398.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
Splicing factor 1/branch point binding protein (RRM superfamily) (ISS); K13095 splicing factor 1
13_1_20cm_2_scaffold_1293_trna_1
unknown

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8257..8328
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_1293_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8404..10029
DNA (1626bp) protein (542aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89857.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_2_scaffold_1293_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10119..11507
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_1293_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11504..12874
DNA (1371bp) protein (457aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein engA
13_1_20cm_2_scaffold_1293_9
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

12871..13488
DNA (618bp) protein (206aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Glycerol-3-phosphate acyltransferase alias=gwe2_scaffold_380_97 id=2000005 tax=TA06 species=Caldithrix abyssi DSM 13497 genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown
membrane protein
13_1_20cm_2_scaffold_1293_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13442..14545
DNA (1104bp) protein (368aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJD9_GEOS8
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
13_1_20cm_2_scaffold_1293_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14542..14919
DNA (378bp) protein (126aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
MerR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory protein MerR
13_1_20cm_2_scaffold_1293_12
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

14903..15604
DNA (702bp) protein (234aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXY1_SORC5
Glycosyltransferase Tax=RBG_16_Planctomycetes_59_8_curated
13_1_20cm_2_scaffold_1293_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15601..16350
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT rbh
13_1_20cm_2_scaffold_1293_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16332..17018
DNA (687bp) protein (229aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_1_20cm_2_scaffold_1293_15
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17011..17652
DNA (642bp) protein (214aa)
Membrane protein DedA n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ED53_GEOBB
Membrane protein DedA {ECO:0000313|EMBL:ACH37639.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensi
membrane protein DedA
13_1_20cm_2_scaffold_1293_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17658..17930
DNA (273bp) protein (91aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
Acylphosphatase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZF6_DEHLB
acylphosphatase
13_1_20cm_2_scaffold_1293_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17946..18482
DNA (537bp) protein (179aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
adenine phosphoribosyltransferase
Displaying 18 items

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