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13_1_20cm_2_scaffold_12992

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_12992_1
R_NC10_66_22, NC10, Bacteria

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1..789
DNA (789bp) protein (263aa)
Candidate ABC type Fe3+ transport system, periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5I1_RAMTT
iron ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
iron ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_12992_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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746..1801
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000317F4B1
iron ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
iron ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_12992_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

1794..2159
DNA (366bp) protein (122aa)
Candidate ABC type Fe3+ transport system, permease component with duplicated domains n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5I2_RAMTT
iron ABC transporter permease; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
iron ABC transporter permease
13_1_20cm_2_scaffold_12992_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

2180..3436
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031F1CDF
iron ABC transporter permease; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
iron ABC transporter permease
13_1_20cm_2_scaffold_12992_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

3447..4517
DNA (1071bp) protein (357aa)
afuC; ABC transporter ATP-binding protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F67446
afuC; ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_12992_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4524..4697)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX09230.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
13_1_20cm_2_scaffold_12992_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4694..5566)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI0003648E82
Uncharacterized protein {ECO:0000313|EMBL:ETW97553.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cyclase
13_1_20cm_2_scaffold_12992_8
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5694..6665)
DNA (972bp) protein (324aa)
NADPH:quinone reductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTR1_CORCM
NADPH:quinone reductase {ECO:0000313|EMBL:AFE10064.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
qor2; NADPH:quinone reductase
13_1_20cm_2_scaffold_12992_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6799..7314
DNA (516bp) protein (172aa)
Putative Thiol-disulfide oxidoreductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAZ6_9BACT
resA; thiol-disulfide oxidoreductase resA Tax=CSP1_6_Rokubacteria
putative thiol-disulfide oxidoreductase
13_1_20cm_2_scaffold_12992_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7344..7553
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96974.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Peroxiredoxin
13_1_20cm_2_scaffold_12992_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

7641..7889
DNA (249bp) protein (83aa)
UPI0003D68720 related cluster n=1 Tax=unknown RepID=UPI0003D68720
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
alkyl hydroperoxide reductase
13_1_20cm_2_scaffold_12992_12
unknown

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comp(7895..8110)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_2_scaffold_12992_13
unknown

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comp(8088..8510)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_2_scaffold_12992_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8518..8730)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YUF3_9BACT
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
30S ribosomal protein S21
13_1_20cm_2_scaffold_12992_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8736..8951)
DNA (216bp) protein (72aa)
id=4283019 Tax=GWC2_Rokubacteria_70_16_curated
13_1_20cm_2_scaffold_12992_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9071..10219)
DNA (1149bp) protein (383aa)
linoleoyl-CoA desaturase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46BB
fatty acid desaturase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fatty acid desaturase
13_1_20cm_2_scaffold_12992_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10698..11705)
DNA (1008bp) protein (336aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL88_ANADE
two component, sigma54 specific, Fis family transcriptional regulator Tax=CSP1_6_Rokubacteria
two component sigma54 specific Fis family transcriptional regulator
13_1_20cm_2_scaffold_12992_18
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12239..12475)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDA7_9BRAD
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC54186.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
putative short-chain dehydrogenase
Displaying 18 items

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