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13_1_20cm_2_scaffold_1312

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1312_1
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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2161..3396
DNA (1236bp) protein (412aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=SYD_METKA
aspartyl-tRNA synthetase Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_20cm_2_scaffold_1312_2
RBG_16_Archaea_50_20_curated, Archaea

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3695..4888
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQC6_THELI
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_1312_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(4945..6102)
DNA (1158bp) protein (386aa)
Transcriptional regulator n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8Y9_9ARCH
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_1312_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6404..7234)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ57_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59138.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein withCobQ/CobB/MinD/ParA nucleotide binding domain
13_1_20cm_2_scaffold_1312_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7878..9353
DNA (1476bp) protein (492aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" s
Pyruvate kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D051_PELTS
PykF; pyruvate kinase
13_1_20cm_2_scaffold_1312_6
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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9409..9819
DNA (411bp) protein (137aa)
50S ribosomal protein L18e n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EF27_PYRF1
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus fumarii (str
50S ribosomal protein L18e
13_1_20cm_2_scaffold_1312_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10022..10633
DNA (612bp) protein (204aa)
Putative amino acid transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II90_NITGG
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus N
multiple antibiotic transporter
13_1_20cm_2_scaffold_1312_8
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10655..11008)
DNA (354bp) protein (118aa)
Large-conductance mechanosensitive channel n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CW67_9ARCH
Large-conductance mechanosensitive channel {ECO:0000313|EMBL:EGP93519.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Can
mscL; large-conductance mechanosensitive ion channel
13_1_20cm_2_scaffold_1312_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(11153..12172)
DNA (1020bp) protein (340aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_1312_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(12361..12939)
DNA (579bp) protein (193aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_1312_11
unknown

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comp(12943..13608)
DNA (666bp) protein (222aa)

This feature has no annotations

13_1_20cm_2_scaffold_1312_12
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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14198..14971
DNA (774bp) protein (258aa)
Fe-S cluster assembly ATP-binding protein SufC n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPH1_9CHLR
FeS assembly ATPase SufC
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_2_scaffold_1312_13
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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14987..15367
DNA (381bp) protein (127aa)
heme biosynthesis protein HemY n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0003032162
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ADH64579.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus
iron-sulfur cluster assembly accessory protein
13_1_20cm_2_scaffold_1312_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15682..16617
DNA (936bp) protein (312aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeracea
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM7_NITGG
13_1_20cm_2_scaffold_1312_15
RBG_16_Archaea_50_20_curated, Archaea

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16614..17024
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037EECBB
nifU; SUF system FeS cluster assembly protein Tax=RBG_16_Archaea_50_20_curated
NifU family SUF system FeS assembly protein
13_1_20cm_2_scaffold_1312_16
unknown

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comp(17053..18642)
DNA (1590bp) protein (530aa)

This feature has no annotations

13_1_20cm_2_scaffold_1312_17
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(18818..19078)
DNA (261bp) protein (87aa)
Putative Rieske (2Fe-2S) domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQX6_9ARCH
Rieske (2Fe-2S) iron-sulfur domain-containing protein; K05710 dioxygenase ferredoxin subunit Tax=CSP1_4_Chloroflexi
dioxygenase ferredoxin protein
13_1_20cm_2_scaffold_1312_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(19138..20559)
DNA (1422bp) protein (474aa)
FeS assembly protein SufD n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBD9_9ARCH
sufD; FeS cluster assembly protein sufD Tax=RBG_16_Archaea_50_20_curated
FeS assembly protein SufD
13_1_20cm_2_scaffold_1312_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20616..22016)
DNA (1401bp) protein (467aa)
FeS cluster assembly protein SufB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9N0_NITGG
FeS cluster assembly protein SufB {ECO:0000313|EMBL:AIC15476.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
sufB; FeS cluster assembly protein SufB
13_1_20cm_2_scaffold_1312_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(22518..23234)
DNA (717bp) protein (239aa)
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Euryarchaeota_68_13_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PX04_METTM
13_1_20cm_2_scaffold_1312_21
BJP_IG2103_Methanoregula_55_19, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(23231..24547)
DNA (1317bp) protein (439aa)
Probable endonuclease 4 n=1 Tax=uncultured archaeon RepID=D1JEL2_9ARCH
putative endonuclease 4
Tax=BJP_IG2103_Methanoregula_55_19
Displaying 21 items

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