ggKbase home page

13_1_20cm_2_scaffold_1356

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1356_1

Not on your lists

164..967
DNA (804bp) protein (268aa)
isopentenyl phosphate kinase (EC:2.7.4.26)
Isopentenyl phosphate kinase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8D3_UNCMA
Marine sediment metagenome DNA, contig: S06H3_C02602 {ECO:0000313|EMBL:GAH94013.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_1356_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(961..1821)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVR1_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_1356_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2088..2543)
DNA (456bp) protein (152aa)
50S ribosomal protein L15e n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A2A8_FERFK
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_16_Archaea_50_20_curated
LSU ribosomal protein L15E
13_1_20cm_2_scaffold_1356_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2569..3993
DNA (1425bp) protein (475aa)
NADP-dependent malic enzyme n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8J1_9EURY
NADP-dependent malic enzyme Tax=RBG_16_Archaea_50_20_curated
NADP-dependent malic enzyme
13_1_20cm_2_scaffold_1356_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4285..4680
DNA (396bp) protein (132aa)
reduced coenzyme f420:nadp oxidoreductase (EC:1.6.99.-)
Reduced coenzyme F420:NADP oxidoreductase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWR0_METFV
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_1356_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4699..5901
DNA (1203bp) protein (401aa)
Translation-associated GTPase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GJ85_METTF rbh
GTP binding protein Tax=RBG_16_Archaea_50_20_curated
ychF; translation-associated GTPase
13_1_20cm_2_scaffold_1356_7
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6560..6937
DNA (378bp) protein (126aa)
extradiol dioxygenase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373F8DD
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EIF32861.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein
13_1_20cm_2_scaffold_1356_8
unknown

Not on your lists

comp(7088..7372)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_2_scaffold_1356_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(7555..8784)
DNA (1230bp) protein (410aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RBG_16_Archaea_50_20_
Sugar-phosphate nucleotydyltransferase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A4I2_THEGJ rbh
glucose-1-phosphate thymidylyltransferase
13_1_20cm_2_scaffold_1356_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8800..9870)
DNA (1071bp) protein (357aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RBG_16_Bathyarchaeota_48_13_curated
phosphoglucomutase/phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase n=1 Tax=Methanococcus maripaludis (strain S2 / LL) RepID=GLMM_METMP
13_1_20cm_2_scaffold_1356_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists


comp(10150..10743)
DNA (594bp) protein (198aa)
30S ribosomal protein S3Ae n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2C0_FERPA
30S ribosomal protein S3Ae Tax=RBG_16_Thaumarchaeota_49_8_curated
ribosomal protein S3Ae
13_1_20cm_2_scaffold_1356_12
unknown

Not on your lists

comp(10749..11003)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_1356_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11000..12445)
DNA (1446bp) protein (482aa)
Archaea-specific RecJ-like exonuclease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5C1_9ARCH
phosphoesterase RecJ domain protein; K07463 archaea-specific RecJ-like exonuclease Tax=RBG_13_Bathyarchaeota_38_9_curated
archaea-specific RecJ-like exonuclease
13_1_20cm_2_scaffold_1356_14
unknown

Not on your lists

12573..12767
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_2_scaffold_1356_15
unknown

Not on your lists

comp(12938..13270)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_20cm_2_scaffold_1356_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(13735..14676)
DNA (942bp) protein (314aa)
Translation initiation factor 2 subunit gamma n=2 Tax=Methanocaldococcus jannaschii RepID=IF2G_METJA
translation initiation factor IF-2; K03242 translation initiation factor 2 subunit 3 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor IF-2
13_1_20cm_2_scaffold_1356_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


14976..15965
DNA (990bp) protein (330aa)
metalloendopeptidase glycoprotease family (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=KAE1_CALMQ
metalloendopeptidase glycoprotease family Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_1356_18
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

15947..16603
DNA (657bp) protein (219aa)
o-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=RBG_16_Bathyarchaeota_57_9_curated
Putative uncharacterized protein PH0445 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58180_PYRHO
O-sialoglycoprotein endopeptidase
13_1_20cm_2_scaffold_1356_19
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


16590..17201
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; N
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=NTPA_THEKO
HAM1 protein
13_1_20cm_2_scaffold_1356_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


17223..17831
DNA (609bp) protein (203aa)
rpoE`; DNA-directed RNA polymerase, subunit E` (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoE'; DNA-directed RNA polymerase, subunit E` (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T895_9ARCH
13_1_20cm_2_scaffold_1356_21
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18368..18916
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTP6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:GAM08490.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1
hypothetical protein
13_1_20cm_2_scaffold_1356_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


19033..19422
DNA (390bp) protein (130aa)
50S ribosomal protein L7Ae n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=RL7A_HYPBU
50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L7Ae
13_1_20cm_2_scaffold_1356_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


19419..19643
DNA (225bp) protein (75aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=RBG_13_Bathyarchaeota_38_9_curated
rps28e; 30S ribosomal protein S28e
13_1_20cm_2_scaffold_1356_24
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

19812..20189
DNA (378bp) protein (126aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=NDK_HYPBU
Displaying 24 items

View Taxonomy