ggKbase home page

13_1_20cm_2_scaffold_13637

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_13637_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..572)
DNA (570bp) protein (190aa)
ada; regulatory protein Ada (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] T
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9K6_9PROT
methylated-DNA/protein-cysteine methyltransferase
13_1_20cm_2_scaffold_13637_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(664..1152)
DNA (489bp) protein (163aa)
DinB family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
DinB family protein alias=RBG1_468,RBG1_C00001G00468 id=1250026 tax=RBG1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria
DinB family protein
13_1_20cm_2_scaffold_13637_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1236..1694)
DNA (459bp) protein (153aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS27_VARPS alias=16ft_combo_ws3_scaffold_12936_16 id=5223505 tax=16ft_combo_ws3 species=Variovorax paradoxus (strain S110) genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
Activator of Hsp90 ATPase 1 family protein Tax=CSP1_5_NC10
Activator of Hsp90 ATPase 1 family protein
13_1_20cm_2_scaffold_13637_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

2164..2916
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00035E859A
diguanylate cyclase Tax=RBG_16_Chloroflexi_63_12_curated
diguanylate cyclase
13_1_20cm_2_scaffold_13637_5
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

2924..3316
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UIQ3_MYXSD
endoribonuclease L-PSP Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
13_1_20cm_2_scaffold_13637_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3313..3762
DNA (450bp) protein (150aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D8A71
Thioredoxin C-3 Tax=GWC2_Gemmatimonadetes_71_10_curated
thioredoxin
13_1_20cm_2_scaffold_13637_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3759..4169
DNA (411bp) protein (137aa)
TM2 domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WPQ1_9ACTO
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_13637_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4243..5349
DNA (1107bp) protein (369aa)
NAD/NADP transhydrogenase alpha subunit n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WP28_9CYAN
NAD/NADP transhydrogenase alpha subunit {ECO:0000313|EMBL:AFZ21539.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PC
NAD/NADP transhydrogenase subunit alpha
13_1_20cm_2_scaffold_13637_9
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

5346..5651
DNA (306bp) protein (102aa)
nicotinamide nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RBG_16_Zixibacteria_53_22_curated
Nicotinamide nucleotide transhydrogenase, subunit alpha n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021P0_SOLUE
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_20cm_2_scaffold_13637_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

5648..7054
DNA (1407bp) protein (469aa)
NAD(P) transhydrogenase, beta subunit; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=RBG_16_Zixibacteria_53_22_curated
NAD(P) transhydrogenase subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIW5_KORVE
NAD(P) transhydrogenase subunit beta
13_1_20cm_2_scaffold_13637_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7063..7539)
DNA (477bp) protein (159aa)
Gll3737 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEZ0_GLOVI alias=16ft_combo_ws3_scaffold_2252_13 id=5224449 tax=16ft_combo_ws3 species=Gloeobacter violaceus (strain PCC 7421) genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
Glyoxalase-like domain protein
13_1_20cm_2_scaffold_13637_12

Not on your lists

7650..8078
DNA (429bp) protein (143aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TZK9_DESML
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
osmC; osmotically inducible protein OsmC
13_1_20cm_2_scaffold_13637_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8084..8761
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0L2_ROSS1
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_13637_14
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

8977..10188
DNA (1212bp) protein (404aa)
rhlE; ATP-dependent RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RBG_16_Acidobacteria_68_9_curated
ATP-dependent RNA helicase RhlE n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXJ0_JANMA
rhlE; ATP-dependent RNA helicase
13_1_20cm_2_scaffold_13637_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10192..10476)
DNA (285bp) protein (95aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
GYD domain superfamily alias=RBG9_47_71,RBG9_C00047G00071 id=1246400 tax=RBG9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
hypothetical protein
13_1_20cm_2_scaffold_13637_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10504..11748)
DNA (1245bp) protein (415aa)
gltA; citrate synthase (EC:2.3.3.1) Tax=CSP1_5_NC10
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Frankia sp. QA3 RepID=I8QR59_9ACTO
Displaying 16 items

View Taxonomy