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13_1_20cm_2_scaffold_139

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_139_1
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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comp(3..509)
DNA (507bp) protein (169aa)
hypothetical protein, partial n=1 Tax=crenarchaeote SCGC AAA261-C22 RepID=UPI0003651824
Fe-S oxidoreductase {ECO:0000313|EMBL:AGB04859.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
Fe-S oxidoreductase
13_1_20cm_2_scaffold_139_2
Thermobaculum terrenum, Thermobaculum, Bacteria

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1007..1489
DNA (483bp) protein (161aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCR7_THET1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACZ42582.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-
alkyl hydroperoxide reductase
13_1_20cm_2_scaffold_139_3
R_OP3X_45_10, OP3X, Bacteria

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1727..3556
DNA (1830bp) protein (610aa)
Probable endonuclease 4 n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXL2_9ARCH
Hedgehog/intein hint domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
apurinic endonuclease (APN1)
13_1_20cm_2_scaffold_139_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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3557..4252
DNA (696bp) protein (232aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TC36_METSL
endonuclease III Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_139_5
unknown

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4380..4766
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_6

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comp(4820..5254)
DNA (435bp) protein (145aa)
Putative histidine triad protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN38_NITGG
Histidine triad (HIT) protein (Hit) {ECO:0000313|EMBL:AIE92020.1}; TaxID=1455897 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_19_G07.;"
histidine triad protein
13_1_20cm_2_scaffold_139_7

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comp(5260..6024)
DNA (765bp) protein (255aa)
methyltransferase (EC:2.1.1.-) alias=scaffold_7_146,RBG2_C00007G00146 id=1242342 tax=RBG2 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
methyltransferase (EC:2.1.1.-)
Marine sediment metagenome DNA, contig: S06H3_S14845 {ECO:0000313|EMBL:GAI44107.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_20cm_2_scaffold_139_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(6028..6570)
DNA (543bp) protein (181aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABQ90367.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ro
ATP--cobalamin adenosyltransferase
13_1_20cm_2_scaffold_139_9

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7327..8388
DNA (1062bp) protein (354aa)
Radical SAM domain-containing protein (PflA, pflC, pflE) {ECO:0000313|EMBL:AIF04611.1}; EC=1.97.1.4 {ECO:0000313|EMBL:AIF04611.1};; TaxID=1456054 species="Archaea; Thaumarchaeota; environmental sample
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00037F89B9
radical SAM domain-containing protein
13_1_20cm_2_scaffold_139_10
unknown

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comp(8903..9154)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_11
unknown

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comp(9455..9796)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_12
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10444..11256)
DNA (813bp) protein (271aa)
putative 3-demethylubiquinol 3-O-methyltransferase (EC:2.1.1.64)
Putative 3-demethylubiquinol 3-O-methyltransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5I2_9PROT
type 11 methyltransferase Tax=GWB2_Geobacteraceae_52_12_curated
13_1_20cm_2_scaffold_139_13
unknown

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comp(11389..12900)
DNA (1512bp) protein (504aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_14
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(13042..13797)
DNA (756bp) protein (252aa)
KNTase domain protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HP66_9BACL
KNTase domain protein {ECO:0000313|EMBL:EHB48903.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
aminoglycoside nucleotidyltransferase
13_1_20cm_2_scaffold_139_15
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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13833..14786
DNA (954bp) protein (318aa)
putative DNA methylase Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
DNA modification methylase-like protein alias=RBG9_65_67,RBG9_C00065G00067 id=1247695 tax=RBG9 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
13_1_20cm_2_scaffold_139_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14859..15122
DNA (264bp) protein (88aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Putative phosphoribosylformylglycinamidine synthase PurS n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
purS; phosphoribosylformylglycinamidine synthase PurS
13_1_20cm_2_scaffold_139_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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15130..15843
DNA (714bp) protein (238aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured archaeon W5-61a RepID=H9BX94_9ARCH
13_1_20cm_2_scaffold_139_18
unknown

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15845..16099
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_19
unknown

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16096..16287
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_20
unknown

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16287..16493
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_139_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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16490..18706
DNA (2217bp) protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
13_1_20cm_2_scaffold_139_22
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

18871..20412
DNA (1542bp) protein (514aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
class II glutamine amidotransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_139_23
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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20436..21725
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVG6_KYRT2
13_1_20cm_2_scaffold_139_24
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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21732..22148
DNA (417bp) protein (139aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Micrarchaeota_36_9_curated
HIT family hydrolase alias=gwf1_scaffold_44_63 id=5102008 tax=WS6_GWF1_36_7 organism_desc=RuBisCO project
histidine triad (HIT) protein
13_1_20cm_2_scaffold_139_25
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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22239..23000
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003612CB9
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
13_1_20cm_2_scaffold_139_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23003..23626
DNA (624bp) protein (208aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:AFU57385.1}; EC=2.1.2.2 {ECO:0000313|EMBL:AFU57385.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM7_NITGG
13_1_20cm_2_scaffold_139_27
unknown

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23623..23718
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 27 items

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