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13_1_20cm_2_scaffold_154

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_154_1
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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1..402
DNA (402bp) protein (134aa)
Putative O-methyltransferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U285_9ARCH
Putative O-methyltransferase {ECO:0000313|EMBL:EMR73045.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
Predicted O-methyltransferase
13_1_20cm_2_scaffold_154_2

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1395..1616
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368CF73
Marine sediment metagenome DNA, contig: S01H4_L01521 {ECO:0000313|EMBL:GAG55566.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_20cm_2_scaffold_154_3
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1613..2338)
DNA (726bp) protein (242aa)
putative esterase (EC:3.1.1.78)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M1L2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB70173.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
13_1_20cm_2_scaffold_154_4
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2416..3348)
DNA (933bp) protein (311aa)
Cupin 2 protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LKL4_9EURY
Cupin 2 protein {ECO:0000313|EMBL:EQB68297.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.;"
cupin
13_1_20cm_2_scaffold_154_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(3536..4123)
DNA (588bp) protein (196aa)
Cysteine dioxygenase type I n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RNZ2_BACME
Cysteine dioxygenase type I Tax=RBG_16_Archaea_50_20_curated
cysteine dioxygenase type I
13_1_20cm_2_scaffold_154_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4288..5478
DNA (1191bp) protein (397aa)
Peptidase M24 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU76_ROSS1
Peptidase M24 {ECO:0000313|EMBL:ABQ90179.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain R
peptidase M24
13_1_20cm_2_scaffold_154_7
unknown

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comp(5586..6116)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_20cm_2_scaffold_154_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6440..7549)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0B0_METPS
nitrogenase subunit NifH (ATPase)-like protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_2_scaffold_154_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(7663..8610)
DNA (948bp) protein (316aa)
Ribokinase n=1 Tax=Gordonia alkanivorans NBRC 16433 RepID=F9VYR0_9ACTO alias=scaffold_9_38,RBG2_C00009G00038 id=1242516 tax=RBG2 species=Gordonia alkanivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
ribokinase Tax=RBG_16_Thaumarchaeota_49_8_curated
ribokinase
13_1_20cm_2_scaffold_154_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(8672..9568)
DNA (897bp) protein (299aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TEM6_THEC1
ribose-phosphate pyrophosphokinase Tax=RBG_16_Archaea_50_20_curated
ribose-phosphate pyrophosphokinase
13_1_20cm_2_scaffold_154_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9763..10308
DNA (546bp) protein (182aa)
PAP2 family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S1M8_9FIRM
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:EKQ52288.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
PAP2 family protein
13_1_20cm_2_scaffold_154_12
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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10395..11165
DNA (771bp) protein (257aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
Universally conserved protein {ECO:0000313|EMBL:ABM80447.1}; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus butylic
hypothetical protein
13_1_20cm_2_scaffold_154_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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11219..12046
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_2_scaffold_154_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12246..14060
DNA (1815bp) protein (605aa)
Amidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISX8_KORVE
Amidase {ECO:0000313|EMBL:ABF40022.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
amidase
13_1_20cm_2_scaffold_154_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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14198..14542
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036BEEE1
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; K05558 pyridoxamine 5'-phosphate oxidase family protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PPOX class probable F420-dependent enzyme, MSMEG_5819 family
13_1_20cm_2_scaffold_154_16
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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comp(14654..16264)
DNA (1611bp) protein (537aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
rci:RCIX2726 hypothetical protein alias=scaffold_3_135,RBG2_C00003G00135 id=1241642 tax=RBG2 species=uncultured marine crenarchaeote E48-1C genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota
Beta propeller domain-containing protein
13_1_20cm_2_scaffold_154_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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16696..17142
DNA (447bp) protein (149aa)
Regulatory protein ArsR n=2 Tax=Archaea RepID=E6N342_9ARCH
regulatory protein, ArsR Tax=RBG_13_Bathyarchaeota_46_16b_curated
regulatory protein, ArsR
13_1_20cm_2_scaffold_154_18
unknown

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18092..18463
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_2_scaffold_154_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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18608..19180
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Brevibacillus laterosporus RepID=UPI000378FC44
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_154_20
RBG_16_Archaea_50_20_curated, Archaea

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comp(19242..19505)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6PAL7_9ARCH
Putative uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_154_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(19521..22925)
DNA (3405bp) protein (1135aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=RBG_13_Bathyarchaeota_46_16b_curated
polA; archaeal DNA polymerase II, large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PU30_METTM
13_1_20cm_2_scaffold_154_22
RBG_16_Archaea_50_20_curated, Archaea

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23113..23586
DNA (474bp) protein (158aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_154_23
unknown

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23765..24070
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_2_scaffold_154_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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24161..25156
DNA (996bp) protein (332aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA polymerase IV n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSZ3_METHD
nucleotidyltransferase/DNA polymerase involved in DNA repair
13_1_20cm_2_scaffold_154_25

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comp(25161..25757)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZU85_9CREN
Marine sediment metagenome DNA, contig: S01H1_L02345 {ECO:0000313|EMBL:GAF74060.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_20cm_2_scaffold_154_26
unknown

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comp(25897..26325)
DNA (429bp) protein (143aa)

This feature has no annotations

Displaying 26 items

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