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13_1_20cm_2_scaffold_158

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_158_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..140
DNA (138bp) protein (46aa)
oxidoreductase (EC:1.-.-.-)
Oxidoreductase n=1 Tax=Bacillus subtilis subsp. subtilis str. RO-NN-1 RepID=G4P663_BACIU
Putative oxidoreductase {ECO:0000313|EMBL:EYF05772.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
13_1_20cm_2_scaffold_158_2
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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275..421
DNA (147bp) protein (49aa)
copper-translocating P-type ATPase
hypothetical protein alias=RBG9_63_7,RBG9_C00063G00007 id=1247340 tax=RBG9 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus
Tax=BJP_08E140C01_Actinomycetales_70_11
13_1_20cm_2_scaffold_158_3

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comp(486..1043)
DNA (558bp) protein (186aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=mine drainage metagenome RepID=T0YDI0_9ZZZZ
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:EQD31188.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bifunctional deaminase-reductase domain-containing protein
13_1_20cm_2_scaffold_158_4
unknown

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1566..2066
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_2_scaffold_158_5
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(2809..4293)
DNA (1485bp) protein (495aa)
Periplasmic copper-binding protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICR0_ACIB4
Periplasmic copper-binding protein {ECO:0000313|EMBL:ADD09142.1}; Periplasmic copper-binding protein (NosD) {ECO:0000313|EMBL:EDY36027.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundu
periplasmic copper-binding protein
13_1_20cm_2_scaffold_158_6
unknown

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comp(4963..5082)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_2_scaffold_158_7
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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comp(5360..7120)
DNA (1761bp) protein (587aa)
ABC transporter related protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWP5_9CYAN
ABC transporter related protein {ECO:0000313|EMBL:AFY86414.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
ABC transporter
13_1_20cm_2_scaffold_158_8
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

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7494..9755
DNA (2262bp) protein (754aa)
nfa:pnf1280 putative cation-transporting ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] alias=ACD30_10963.70249.11G0050,ACD30_10963.70249.11_50,ACD30_C00012G00050 id=35978 tax=ACD30 species=Janibacter sp. HTCC2649 genus=Janibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OP11 organism_desc=OP11
ATPase P Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
hypothetical protein
13_1_20cm_2_scaffold_158_9
unknown

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comp(9905..10360)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_158_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11468..12541
DNA (1074bp) protein (358aa)
Tetracycline efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7J5_9BACT
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
tetA; tetracycline efflux transporter
13_1_20cm_2_scaffold_158_11
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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13169..13588
DNA (420bp) protein (140aa)
DNA polymerase beta domain protein region Tax=RBG_13_Euryarchaeota_61_15_curated
DNA polymerase beta domain protein region alias=gwe2_scaffold_456_17 id=2040184 tax=TA06 species=Microcoleus vaginatus FGP-2 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria
13_1_20cm_2_scaffold_158_12
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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13750..14127
DNA (378bp) protein (126aa)
DNA polymerase beta domain protein region Tax=RBG_13_Euryarchaeota_61_15_curated
DNA polymerase beta domain protein region alias=gwe2_scaffold_456_17 id=2040184 tax=TA06 species=Microcoleus vaginatus FGP-2 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria
DNA polymerase beta domain protein region
13_1_20cm_2_scaffold_158_13
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

14265..15173
DNA (909bp) protein (303aa)
Luciferase-like, subgroup n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ14_9CHLR
putative F420-dependent oxidoreductase Tax=RBG_13_Chloroflexi_50_21_curated
putative F420-dependent oxidoreductase
13_1_20cm_2_scaffold_158_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15391..16062
DNA (672bp) protein (224aa)
Transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0ZKK3_9ZZZZ
Putative transcriptional regulator {ECO:0000313|EMBL:AIC15446.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
putative transcriptional regulator
13_1_20cm_2_scaffold_158_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16059..16778
DNA (720bp) protein (240aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTT8_TRURR
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Euryarchaeota_68_12_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_158_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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16793..17815
DNA (1023bp) protein (341aa)
Queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Euryarchaeota_68_12_curated
Queuosine biosynthesis protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTT7_TRURR
Queuosine biosynthesis protein
13_1_20cm_2_scaffold_158_17

Not on your lists

comp(17913..18548)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN36749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_158_18
unknown

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18740..18994
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_158_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(19819..23781)
DNA (3963bp) protein (1321aa)
hypothetical protein, partial n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00036B9697
putative hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_1_20cm_2_scaffold_158_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(24712..25329)
DNA (618bp) protein (206aa)
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 20 items

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