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13_1_20cm_2_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_16_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..295
DNA (294bp) protein (98aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lon; DNA-binding ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Frankia sp. QA3 RepID=I8QMF1_9ACTO
13_1_20cm_2_scaffold_16_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

415..2952
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_2_scaffold_16_3
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2997..3497)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003121337
Transcriptional regulator {ECO:0000313|EMBL:EHR02978.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
TetR family transcriptional regulator
13_1_20cm_2_scaffold_16_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3584..4582)
DNA (999bp) protein (333aa)
Alpha/beta hydrolase fold protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ28_TRURR
alpha/beta hydrolase fold protein Tax=RBG_16_Chloroflexi_68_14_curated
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_16_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4582..5244)
DNA (663bp) protein (221aa)
Transcriptional regulator, TrmB n=3 Tax=Desulfovibrio vulgaris RepID=A1VB87_DESVV
transcriptional regulator TrmB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TrmB family transcriptional regulator
13_1_20cm_2_scaffold_16_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5335..6450)
DNA (1116bp) protein (372aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_16_7
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(6639..8270)
DNA (1632bp) protein (544aa)
Peptidase M28 n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCN4_9CYAN rbh
Peptidase M28 {ECO:0000313|EMBL:AGY56682.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
peptidase M28
13_1_20cm_2_scaffold_16_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8351..10372
DNA (2022bp) protein (674aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Gemmatimonadetes_66_8_curated
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0G3_SORC5
13_1_20cm_2_scaffold_16_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10382..11644)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PZ0_SYMTH
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_16_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11699..14077)
DNA (2379bp) protein (793aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C7_SOLUE
peptidase M14, carboxypeptidase A Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
13_1_20cm_2_scaffold_16_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14081..16183)
DNA (2103bp) protein (701aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A855_GEMAT
putative S9C family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
WD40-like beta Propeller containing protein
13_1_20cm_2_scaffold_16_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16295..17887)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037D0457
ompA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
OmpA family protein
13_1_20cm_2_scaffold_16_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17898..19340)
DNA (1443bp) protein (481aa)
OmpA domain protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JEY0_9BACT
ompA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_16_14
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19395..20885)
DNA (1491bp) protein (497aa)
KLHL31; kelch-like 31 (Drosophila); K10467 kelch-like protein 31 Tax=GWA2_Elusimicrobia_62_23_curated
13_1_20cm_2_scaffold_16_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20839..22959)
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003688C31
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tlpA; methyl-accepting chemotaxis protein
13_1_20cm_2_scaffold_16_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23309..24376
DNA (1068bp) protein (356aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUB5_ROSS1 rbh
13_1_20cm_2_scaffold_16_17
unknown

Not on your lists

24538..24840
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_2_scaffold_16_18
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24985..25872)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7G4_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:CDG80975.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
putative uncharacterized protein
13_1_20cm_2_scaffold_16_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25944..28496
DNA (2553bp) protein (851aa)
Putative helicase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
helicase, DEAD/DEAH family
13_1_20cm_2_scaffold_16_20

Not on your lists

28544..29071
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHN97945.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
acxR; sigma54-dependent activator protein AcxR
13_1_20cm_2_scaffold_16_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29151..29618
DNA (468bp) protein (156aa)
hypothetical protein; K12073 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Pol-Pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=E6PEA1_9ZZZZ
thioesterase superfamily protein
13_1_20cm_2_scaffold_16_22
unknown

Not on your lists

29636..30121
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_2_scaffold_16_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

30118..31176
DNA (1059bp) protein (353aa)
Oxidoreductase, Gfo/Idh/MocA family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WZ1_STIAD
Predicted dehydrogenase {ECO:0000313|EMBL:CDM66525.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Gfo/Idh/MocA family oxidoreductase
13_1_20cm_2_scaffold_16_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31181..32383
DNA (1203bp) protein (401aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR7_9BACT
hydroxymethylbutenyl pyrophosphate reductase
13_1_20cm_2_scaffold_16_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

32417..36763
DNA (4347bp) protein (1449aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL rbh
DEAD/DEAH box helicase
13_1_20cm_2_scaffold_16_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(36769..37206)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I408_CALAS
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_16_27
unknown

Not on your lists

comp(37282..37659)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_2_scaffold_16_28

Not on your lists

37769..39961
DNA (2193bp) protein (731aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
Putative xanthine dehydrogenase {ECO:0000313|EMBL:ADC35806.1}; TaxID=698391 species="Bacteria; environmental samples.;" source="uncultured bacterium 66.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_20cm_2_scaffold_16_29
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40059..40538
DNA (480bp) protein (160aa)
(2Fe-2S)-binding domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT8_HALO1
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACY18445.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Ha
(2Fe-2S)-binding domain-containing protein
13_1_20cm_2_scaffold_16_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

40535..41362
DNA (828bp) protein (276aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT7_HALO1
FAD-binding molybdopterin dehydrogenase protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD-binding molybdopterin dehydrogenase protein
Displaying items 1-30 of 57 in total

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