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13_1_20cm_2_scaffold_160

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_160_trna_2
unknown

Not on your lists

comp(446..519)
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_160_1

Not on your lists

comp(767..1570)
DNA (804bp) protein (268aa)
Inositol-phosphate phosphatase (IMPA, suhB) {ECO:0000313|EMBL:AIF13917.1}; EC=3.1.3.25 {ECO:0000313|EMBL:AIF13917.1};; TaxID=1456223 species="Archaea; Thaumarchaeota; environmental samples.;" source="
Inositol-phosphate phosphatase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUT0_9ARCH rbh
Inositol-phosphate phosphatase
13_1_20cm_2_scaffold_160_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1656..2774
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU54_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI06281.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_160_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2781..3941
DNA (1161bp) protein (387aa)
Putative ATPase family associated with various cellular activities (AAA) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUT3_9ARCH rbh
ATPase central domain-containing protein Tax=CSP1_1_Thaumarchaeota
ATPase, AAA family
13_1_20cm_2_scaffold_160_4
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3938..4252
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B7D7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFS82063.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
hypothetical protein
13_1_20cm_2_scaffold_160_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4802..5074
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06277.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_160_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5111..6658
DNA (1548bp) protein (516aa)
Putative carboxyl transferase domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97P9 RepID=B3T3G4_9ARCH rbh
carboxyl transferase Tax=CSP1_1_Thaumarchaeota
carboxyl transferase domain protein
13_1_20cm_2_scaffold_160_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6665..8158
DNA (1494bp) protein (498aa)
Putative acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E0F7_9ARCH rbh
carbamoyl-phosphate synthase L chain ATP-binding protein Tax=CSP1_1_Thaumarchaeota
carbamoyl-phosphate synthase L chain ATP-binding protein
13_1_20cm_2_scaffold_160_8

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8160..8672
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003631778
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AIF13911.1}; TaxID=1456223 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_
biotin/lipoyl attachment domain-containing protein
13_1_20cm_2_scaffold_160_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8715..9179)
DNA (465bp) protein (155aa)
Peroxiredoxin n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUY0_9ARCH
peroxiredoxin Tax=CSP1_1_Thaumarchaeota
peroxiredoxin
13_1_20cm_2_scaffold_160_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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9318..9734
DNA (417bp) protein (139aa)
NADH-ubiquinone oxidoreductase, subunit A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS1_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 {ECO:0000313|EMBL:EPA04856.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" s
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
13_1_20cm_2_scaffold_160_11
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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9778..10305
DNA (528bp) protein (176aa)
NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0G5_9ARCH rbh
NADH-quinone oxidoreductase, B subunit {ECO:0000313|EMBL:AJA92337.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
NADH-quinone oxidoreductase, B subunit
13_1_20cm_2_scaffold_160_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10308..10979
DNA (672bp) protein (224aa)
NADH-ubiquinone oxidoreductase, subunit C {ECO:0000313|EMBL:CDI06270.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDI06270.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" sourc
NADH-ubiquinone oxidoreductase subunit C (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase, subunit C n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS2_9ARCH
13_1_20cm_2_scaffold_160_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

10981..12114
DNA (1134bp) protein (378aa)
NADH-quinone oxidoreductase subunit D {ECO:0000313|EMBL:CDI06269.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CDI06269.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="
NADH-ubiquinone oxidoreductase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUP4_9ARCH rbh
13_1_20cm_2_scaffold_160_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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12115..13416
DNA (1302bp) protein (434aa)
NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU06_9ARCH rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:EGP93009.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitros
NADH dehydrogenase
13_1_20cm_2_scaffold_160_15
Cenarchaeum symbiosum, Cenarchaeum, Cenarchaeales, Thaumarchaeota, Archaea

Not on your lists

13413..13910
DNA (498bp) protein (166aa)
NADH-ubiquinone oxidoreductase, subunit I {ECO:0000313|EMBL:ABK78287.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABK78287.1};; TaxID=414004 species="Archaea; Thaumarchaeota; Cenarchaeales; Cenarchaeaceae; Cenarc
NADH-ubiquinone oxidoreductase subunit I (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RY70_CENSY rbh
13_1_20cm_2_scaffold_160_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

13903..14415
DNA (513bp) protein (171aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU45_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:CDI06266.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
13_1_20cm_2_scaffold_160_17
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

14396..14701
DNA (306bp) protein (102aa)
NADH dehydrogenase subunit K {ECO:0000313|EMBL:EPA05552.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EPA05552.1};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus N
ndhE; NAD(P)H-quinone oxidoreductase subunit 4L (EC:1.6.5.-)
NADH dehydrogenase subunit K n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EM07_9ARCH
13_1_20cm_2_scaffold_160_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

14701..16254
DNA (1554bp) protein (518aa)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E2Q7_9ARCH rbh
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:EPA05555.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.
proton-translocating NADH-quinone oxidoreductase subunit M
13_1_20cm_2_scaffold_160_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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16258..18342
DNA (2085bp) protein (695aa)
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:CDI06263.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CDI06263.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thauma
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUX1_9ARCH rbh
Proton-translocating NADH-quinone oxidoreductase subunit L
13_1_20cm_2_scaffold_160_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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18352..19839
DNA (1488bp) protein (496aa)
Putative NADH-ubiquinone/plastoquinone (Complex I) n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6D3 RepID=B3T907_9ARCH
proton-translocating NADH-quinone oxidoreductase subunit N Tax=CSP1_1_Thaumarchaeota
proton-translocating NADH-quinone oxidoreductase, chain N
13_1_20cm_2_scaffold_160_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19829..20680)
DNA (852bp) protein (284aa)
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=CSP1_1_Thaumarchaeota
Polyprenyl synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU42_9ARCH rbh
polyprenyl synthetase
13_1_20cm_2_scaffold_160_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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20908..21546
DNA (639bp) protein (213aa)
TENA/THI-4 domain-containing protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=CSP1_1_Thaumarchaeota
TENA/THI-4 family protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EJ66_9ARCH
TENA/THI-4 domain protein
13_1_20cm_2_scaffold_160_trna_1
unknown

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21589..21662
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_160_23
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

21985..22548
DNA (564bp) protein (188aa)
2-alkenal reductase (EC:1.3.1.74)
TATA-box-binding protein n=2 Tax=Nitrosopumilaceae RepID=A9A365_NITMS rbh
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
13_1_20cm_2_scaffold_160_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22560..22751)
DNA (192bp) protein (64aa)
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KL46_9ARCH
orotate phosphoribosyltransferase Tax=CSP1_1_Thaumarchaeota
Displaying 26 items

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