ggKbase home page

13_1_20cm_2_scaffold_1605

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1605_1
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..878
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DH67_SINAD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_2
unknown

Not on your lists

958..1128
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_3
unknown

Not on your lists

1125..1253
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_4
unknown

Not on your lists

comp(1486..1794)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1892..2206)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002DD8B16
MFS transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2381..2848)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLN0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_7
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2845..3012)
DNA (168bp) protein (56aa)
id=24551213 Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
13_1_20cm_2_scaffold_1605_8
unknown

Not on your lists

3448..3864
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_9
unknown

Not on your lists

4107..4280
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_10
unknown

Not on your lists

comp(4271..4417)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_11
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

4637..4894
DNA (258bp) protein (86aa)
Glycosyl transferase family 2 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TVJ6_9CYAN
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFY86413.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
family 2 glycosyl transferase
13_1_20cm_2_scaffold_1605_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

5005..7419
DNA (2415bp) protein (805aa)
Cna B domain-containing protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBR9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_13
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7497..10259
DNA (2763bp) protein (921aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AFZ29510.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AFZ29510.1};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocap
Xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XA32_9CHRO
13_1_20cm_2_scaffold_1605_14
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10244..11425
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIF5_SINAD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_15
unknown

Not on your lists

11448..12974
DNA (1527bp) protein (509aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_16
unknown

Not on your lists

13078..14148
DNA (1071bp) protein (357aa)

This feature has no annotations

13_1_20cm_2_scaffold_1605_17
R_OP11_Levybacteria_36_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

14155..14838
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIW2_SINAD
hypothetical protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_36_13_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_18
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14835..16055
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIA6_SINAD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_19
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16078..17379
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIA6_SINAD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_2_scaffold_1605_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17777..18796)
DNA (1020bp) protein (340aa)
Phage integrase family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RK4_SOLUE
Phage integrase family protein {ECO:0000313|EMBL:ABJ87716.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
phage integrase family protein
13_1_20cm_2_scaffold_1605_21
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18793..19767)
DNA (975bp) protein (325aa)
Phage integrase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DSL3_THIND
Phage integrase {ECO:0000313|EMBL:AGA32604.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio
phage integrase
13_1_20cm_2_scaffold_1605_22

Not on your lists

comp(19764..21056)
DNA (1293bp) protein (431aa)
Putative integrase/recombinase n=1 Tax=uncultured bacterial symbiont of Discodermia dissoluta RepID=Q49HK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL73657.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase/recombinase
13_1_20cm_2_scaffold_1605_23
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21193..21708)
DNA (516bp) protein (172aa)
Transposition helper protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AAL0_9ZZZZ
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
transposase-associated IstB-like ATP-binding protein
13_1_20cm_2_scaffold_1605_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21705..22265)
DNA (561bp) protein (187aa)
Integrase, catalytic region (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C7R6_9ZZZZ
transposase, putative Tax=RBG_16_Acidobacteria_70_10_curated
transposase, putative
13_1_20cm_2_scaffold_1605_25
unknown

Not on your lists

comp(22262..22387)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 25 items

View Taxonomy