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13_1_20cm_2_scaffold_1671

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1671_trna_3
unknown

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comp(10..81)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_1671_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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170..727
DNA (558bp) protein (186aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATZ3_9ARCH
alkyl hydroperoxide reductase Tax=CSP1_1_Thaumarchaeota
alkyl hydroperoxide reductase
13_1_20cm_2_scaffold_1671_trna_1
unknown

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753..840
DNA (88bp)
transferRNA
13_1_20cm_2_scaffold_1671_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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964..1314
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AST3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05776.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_1671_3

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comp(1308..2207)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036CBA67
Putative transcriptional regulator {ECO:0000313|EMBL:AIE99600.1}; TaxID=1455988 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_115_A11.;"
transcriptional regulator
13_1_20cm_2_scaffold_1671_4
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2723..3109
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY06_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP94361.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarch
hypothetical protein
13_1_20cm_2_scaffold_1671_trna_2
unknown

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3330..3403
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_1671_5
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3430..4764)
DNA (1335bp) protein (445aa)
Sensor protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWU3_9ARCH
PAS domain S-box {ECO:0000313|EMBL:EPA05391.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum lim
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_1671_6
unknown

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comp(4958..5506)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_2_scaffold_1671_7

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comp(5584..6444)
DNA (861bp) protein (287aa)
DNA adenine methylase n=1 Tax=uncultured archaeon RepID=I3RL07_9ARCH rbh
DNA adenine methylase {ECO:0000313|EMBL:AFK25017.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
DNA adenine methylase
13_1_20cm_2_scaffold_1671_8

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comp(6581..7231)
DNA (651bp) protein (217aa)
Ammonia monooxygenase (Fragment) n=1 Tax=uncultured archaeon RepID=G8GRC3_9ARCH rbh
Ammonia monooxygenase {ECO:0000313|EMBL:AET35945.1}; Flags: Fragment;; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
amoA; ammonia monooxygenase, subunit A
13_1_20cm_2_scaffold_1671_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7349..7630)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RL09_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_1671_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(7739..8302)
DNA (564bp) protein (188aa)
Ammonia monooxygenase subunit C n=2 Tax=Archaea RepID=I3RL10_9ARCH rbh
Ammonia monooxygenase/methane monooxygenase, subunit C {ECO:0000313|EMBL:CDI06188.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.
amoC; Ammonia monooxygenase, subunit C
13_1_20cm_2_scaffold_1671_11

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8570..9136
DNA (567bp) protein (189aa)
Ammonia monooxygenase subunit B n=1 Tax=uncultured archaeon RepID=I3RL11_9ARCH
Ammonia monooxygenase subunit B {ECO:0000313|EMBL:AFK25021.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
monooxygenase subunit B domain protein
13_1_20cm_2_scaffold_1671_12
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9199..9576)
DNA (378bp) protein (126aa)
membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJW71754.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_20cm_2_scaffold_1671_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9631..10107)
DNA (477bp) protein (159aa)
Putative signal transduction response regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICC7_NITGG
Putative signal transduction response regulator {ECO:0000313|EMBL:AFU57200.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
signal transduction response regulator
13_1_20cm_2_scaffold_1671_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(10208..10516)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KI54_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42962.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_20cm_2_scaffold_1671_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

10650..10940
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05887.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_1671_16

Not on your lists

comp(10997..11689)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQI5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKK93203.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_1671_17
unknown

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comp(11794..11997)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_1671_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12124..13629)
DNA (1506bp) protein (502aa)
Ammonium transporter NrgA n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP03_NITGG
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitro
ammonium transporter
13_1_20cm_2_scaffold_1671_19
unknown

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13805..13969
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_2_scaffold_1671_20
unknown

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14039..14524
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_2_scaffold_1671_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14561..15031)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH3_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59374.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_1671_22
unknown

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15157..15384
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_2_scaffold_1671_23
unknown

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15426..15899
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_2_scaffold_1671_24

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comp(16196..16948)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97J3 RepID=B3T385_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF12278.1}; TaxID=1456195 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_55_A11.;"
hypothetical protein
13_1_20cm_2_scaffold_1671_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17086..17250
DNA (165bp) protein (55aa)
Putative nitrogen regulatory protein P-II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR2_NITGG
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFU57372.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
nitrogen regulatory protein P-II
Displaying 28 items

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