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13_1_20cm_2_scaffold_1691

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1691_1
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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1..606
DNA (606bp) protein (202aa)
Radical SAM protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XSJ6_9PROT
radical SAM domain protein Tax=RBG_16_Zixibacteria_48_11_curated
radical SAM protein
13_1_20cm_2_scaffold_1691_2
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(609..980)
DNA (372bp) protein (124aa)
UPF0102 protein OSCT_0607 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBA6_9CHLR
hypothetical protein; K07460 putative endonuclease Tax=RBG_16_Chloroflexi_64_32_curated
hypothetical protein
13_1_20cm_2_scaffold_1691_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(981..1931)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4TLY5_9MYCO
php; phosphotriesterase PHP; K07048 phosphotriesterase-related protein Tax=RBG_16_Chloroflexi_68_14_curated
putative metal-dependent hydrolase with the TIM-barrel fold
13_1_20cm_2_scaffold_1691_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(1961..2608)
DNA (648bp) protein (216aa)
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RBG_16_Chloroflexi_64_32_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYZ1_ANATU
13_1_20cm_2_scaffold_1691_5
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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2743..2931
DNA (189bp) protein (63aa)
4-oxalocrotonate tautomerase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SL62_9RHOB
4-oxalocrotonate tautomerase Tax=RBG_16_Chloroflexi_64_32_curated
4-oxalocrotonate tautomerase
13_1_20cm_2_scaffold_1691_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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3065..5020
DNA (1956bp) protein (652aa)
metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RBG_16_Chloroflexi_64_32_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00037FEED8 rbh
13_1_20cm_2_scaffold_1691_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists


5210..5719
DNA (510bp) protein (170aa)
50S ribosomal protein L21 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNN8_9CHLR
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_16_Chloroflexi_64_32_curated
50S ribosomal protein L21
13_1_20cm_2_scaffold_1691_8
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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5726..5986
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=RL27_METCA
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RBG_13_Actinobacteria_63_9_curated
rpmA; 50S ribosomal protein L27
13_1_20cm_2_scaffold_1691_9
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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5993..6196
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEQ5_THET1
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RBG_13_Actinobacteria_63_9_curated
50S ribosomal protein L31
13_1_20cm_2_scaffold_1691_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

6266..7207
DNA (942bp) protein (314aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SG98_9ZZZZ
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
hypothetical protein
13_1_20cm_2_scaffold_1691_11
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(7204..7527)
DNA (324bp) protein (108aa)
phosphoribosyl-AMP cyclohydrolase ;phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31); K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]
phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
hypothetical protein n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002FF5A05
13_1_20cm_2_scaffold_1691_12

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comp(7556..8323)
DNA (768bp) protein (256aa)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB53_AMMDK
Uncharacterized protein {ECO:0000313|EMBL:KKM26119.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
imidazole glycerol phosphate synthase subunit HisF
13_1_20cm_2_scaffold_1691_13

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comp(8342..9625)
DNA (1284bp) protein (428aa)
acyl-CoA dehydrogenase n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B79029 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM26121.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_1691_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(9659..10384)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RBG
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=HIS4_CHLAD
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
13_1_20cm_2_scaffold_1691_15

Not on your lists

comp(10404..11027)
DNA (624bp) protein (208aa)
Glutamine amidotransferase n=1 Tax=uncultured prokaryote RepID=H5SPI9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKL10811.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
imidazole glycerol phosphate synthase glutamine amidotransferase subunit
13_1_20cm_2_scaffold_1691_16
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(11369..11866)
DNA (498bp) protein (166aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=RBG_16_Chloroflexi_64_32_curated
GNAT family acetyltransferase n=1 Tax=Laceyella sacchari RepID=UPI0003B61C93
phosphinothricin acetyltransferase
13_1_20cm_2_scaffold_1691_17
unknown

Not on your lists

comp(12075..12182)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_20cm_2_scaffold_1691_18
unknown

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comp(12203..12922)
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_20cm_2_scaffold_1691_19
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

13073..15061
DNA (1989bp) protein (663aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RBG_16_Chloroflexi_68_14_curated
det:DET0596 ligA; DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] alias=scaffold_9_75,RBG2_C00009G00075 id=1242553 tax=RBG2 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi rbh
ligA; DNA ligase (EC:6.5.1.2)
13_1_20cm_2_scaffold_1691_20

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15051..15659
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL63513.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative Micrococcal nuclease alias=gwa2_scaffold_993_9 id=5085184 tax=GWA2_OP11 organism_desc=RuBisCO project
nuclease
13_1_20cm_2_scaffold_1691_21
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

15837..16751
DNA (915bp) protein (305aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJU2_ROSCS
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_Chloroflexi_64_32_curated
rod shape-determining protein MreB
13_1_20cm_2_scaffold_1691_22

Not on your lists

16818..17777
DNA (960bp) protein (320aa)
Cell shape-determining protein MreC n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCL9_THET1
Marine sediment metagenome DNA, contig: S01H1_S43302 {ECO:0000313|EMBL:GAG45247.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rod shape-determining protein MreC
13_1_20cm_2_scaffold_1691_23
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

17834..18295
DNA (462bp) protein (154aa)
Rod shape-determining protein MreD n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5P2_SPHTD
rod shape-determining protein MreD
Tax=RBG_16_Acidobacteria_64_8_curated
13_1_20cm_2_scaffold_1691_24
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

18314..20224
DNA (1911bp) protein (637aa)
hor:Hore_14210 peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 alias=ACD63_C00095G00003,ACD63_51873.7415.9G0003,ACD63_51873.7415.9_3 id=96523 tax=ACD63 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1 rbh
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RBG_16_Chloroflexi_64_32_curated
mrdA; penicillin-binding protein 2
13_1_20cm_2_scaffold_1691_25
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

20221..21333
DNA (1113bp) protein (371aa)
Rod shape-determining protein RodA n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDH7_THET1 rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RBG_16_Chloroflexi_64_32_curated
rod shape-determining protein RodA
13_1_20cm_2_scaffold_1691_26
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

21348..21662
DNA (315bp) protein (105aa)
Amidohydrolase 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6P9_9CHLR
amidohydrolase 2; K07045 Tax=RBG_16_Chloroflexi_68_14_curated
amidohydrolase 2
Displaying 26 items

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