ggKbase home page

13_1_20cm_2_scaffold_17726

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_17726_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..175)
DNA (174bp) protein (58aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P9_SPHTD
molybdopterin dehydrogenase FAD-binding protein
13_1_20cm_2_scaffold_17726_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(172..2547)
DNA (2376bp) protein (792aa)
carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) (EC:1.2.99.2)
Carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4R1_THERP rbh
putative dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_17726_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2544..3035)
DNA (492bp) protein (164aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGF2_THEM7
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:ADU51604.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobac
(2Fe-2S)-binding domain-containing protein
13_1_20cm_2_scaffold_17726_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3035..3403)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCY9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE72953.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
13_1_20cm_2_scaffold_17726_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3441..3833)
DNA (393bp) protein (131aa)
UPI0003CE464E related cluster n=1 Tax=unknown RepID=UPI0003CE464E
translation initiation inhibitor Tax=RBG_16_Betaproteobacteria_64_18_curated
putative translation initiation inhibitor, yjgF family
13_1_20cm_2_scaffold_17726_6
unknown

Not on your lists

comp(3854..4135)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_2_scaffold_17726_7
unknown

Not on your lists

comp(4132..4251)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_2_scaffold_17726_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4251..4895)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003612CC3
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_17726_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4957..5274)
DNA (318bp) protein (106aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3F2_ISOPI
dioxygenase, ferredoxin subunit Tax=RBG_13_Deltaproteobacteria_65_10_curated
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_2_scaffold_17726_10
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5283..6503)
DNA (1221bp) protein (407aa)
Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK45_THEYD
Leu/ile/val-binding protein {ECO:0000313|EMBL:ACI21571.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (
leu/ile/val-binding protein
13_1_20cm_2_scaffold_17726_11
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6526..7395)
DNA (870bp) protein (290aa)
Inner-membrane translocator n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBX5_METS4
Inner-membrane translocator {ECO:0000313|EMBL:ACA19935.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobac
inner-membrane translocator
13_1_20cm_2_scaffold_17726_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7397..7837)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM73_AFIFE
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM23574.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
Branched-chain amino acid transport ATP-binding protein LivF
13_1_20cm_2_scaffold_17726_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7834..8061)
DNA (228bp) protein (76aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Polaromonas sp. CF318 RepID=J2TJV7_9BURK
urea ABC transporter ATP-binding protein UrtE Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_17726_14

Not on your lists

comp(8058..8435)
DNA (378bp) protein (126aa)
ABC transporter n=1 Tax=Martelella mediterranea RepID=UPI000369AA2F
Marine sediment metagenome DNA, contig: S12H4_S03467 {ECO:0000313|EMBL:GAI92187.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_2_scaffold_17726_15
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8393..8779)
DNA (387bp) protein (129aa)
sulfate-transporting ATPase (EC:3.6.3.25); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Chloroflexi_52_14_curated
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D539_PELTS
LivG; ABC-type branched-chain amino acid transport systems, ATPase component
13_1_20cm_2_scaffold_17726_16
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(8776..9687)
DNA (912bp) protein (304aa)
Inner-membrane translocator n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK72_SYNFM
high-affinity branched-chain amino acid transport system permease protein livm; K01998 branched-chain amino acid transport system permease protein Tax=CG_OP9-01
inner-membrane translocator
13_1_20cm_2_scaffold_17726_17
unknown

Not on your lists

comp(9692..9757)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 17 items

View Taxonomy