ggKbase home page

13_1_20cm_2_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_179_1

Not on your lists

225..614
DNA (390bp) protein (130aa)
Ribosomal protein L31e n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATZ5_9ARCH
Ribosomal protein L31e (RP-L31e, RPL31) {ECO:0000313|EMBL:AIF25307.1}; TaxID=1456417 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_50_F07.
Ribosomal protein L31e (modular protein)
13_1_20cm_2_scaffold_179_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(617..1558)
DNA (942bp) protein (314aa)
Tubulin/FtsZ family, GTPase domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E572_9ARCH
tubulin/FtsZ GTPase Tax=CSP1_1_Thaumarchaeota
tubulin/FtsZ family, GTPase domain protein
13_1_20cm_2_scaffold_179_3

Not on your lists

comp(1646..2914)
DNA (1269bp) protein (423aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B882_9ARCH
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:AIF15562.1}; TaxID=1456254 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_E10.;"
MiaB-like tRNA modifying enzyme
13_1_20cm_2_scaffold_179_4
uncultured marine crenarchaeote HF4000_ANIW97M7, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(2917..4311)
DNA (1395bp) protein (465aa)
Putative Lyase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97M7 RepID=B3T3C4_9ARCH rbh
Putative Lyase {ECO:0000313|EMBL:ABZ07083.1}; TaxID=455568 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW97M7.;"
fumarate lyase
13_1_20cm_2_scaffold_179_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

4434..5753
DNA (1320bp) protein (440aa)
nirK; putative copper-containing nitrite reductase (EC:1.7.2.1)
NirK, nitrite reductase multicopper oxidase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATE4_9ARCH rbh
NirK, nitrite reductase multicopper oxidase {ECO:0000313|EMBL:CDI05991.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_179_6

Not on your lists

5823..6776
DNA (954bp) protein (318aa)
D-isomer specific 2-hydroxyacid dehydrogenase (SerA, PHGDH) {ECO:0000313|EMBL:AIF12595.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AIF12595.1};; TaxID=1456203 species="Archaea; Thaumarchaeota; environmental sam
pdxB; 4-phosphoerythronate dehydrogenase (EC:1.1.1.290)
2-hydroxyacid dehydrogenase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036AEAF3
13_1_20cm_2_scaffold_179_7
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

6785..7516
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D5F5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EIJ66948.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria B
hypothetical protein
13_1_20cm_2_scaffold_179_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(7518..8144)
DNA (627bp) protein (209aa)
Putative Pentapeptide repeats (8 copies) n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ20_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_179_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

8259..8717
DNA (459bp) protein (153aa)
Putative ribosomal L15 n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97M7 RepID=B3T3C9_9ARCH
50S ribosomal protein L15e Tax=CSP1_1_Thaumarchaeota
50S ribosomal protein L15e
13_1_20cm_2_scaffold_179_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

8714..9217
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RW65_CENSY
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_179_11
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9214..9903)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5T7_NITMS
Uncharacterized protein {ECO:0000313|EMBL:ABX13092.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
hypothetical protein
13_1_20cm_2_scaffold_179_12

Not on your lists

comp(10197..10427)
DNA (231bp) protein (77aa)
Transcriptional regulator, AsnC family n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYH5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL28605.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
13_1_20cm_2_scaffold_179_13
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(10704..11120)
DNA (417bp) protein (139aa)
Sugar-specific transcriptional regulator TrmB n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D3N8_9ARCH
Sugar-specific transcriptional regulator TrmB {ECO:0000313|EMBL:EIJ66331.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Ni
transcriptional regulator TrmB
13_1_20cm_2_scaffold_179_14
unknown

Not on your lists

11273..11566
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_2_scaffold_179_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(11657..12856)
DNA (1200bp) protein (400aa)
tRNA pseudouridine synthase TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CSP1_1_Thaumarchaeota
tRNA pseudouridine synthase D TruD n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5T9_NITMS
tRNA pseudouridine synthase TruD
13_1_20cm_2_scaffold_179_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(12860..14419)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D408_9ARCH rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_179_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14516..15610
DNA (1095bp) protein (365aa)
Putative transmembrane protein n=1 Tax=uncultured crenarchaeote RepID=Q8NKM7_9CREN
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AIF85472.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitroso
putative esterase of the alpha-beta hydrolase superfamily
13_1_20cm_2_scaffold_179_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15754..16050
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
putative RNA-binding protein, contains TRAM domain
13_1_20cm_2_scaffold_179_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(16367..16915)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARN1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05396.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_179_20
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(16921..18270)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS82_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI05395.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_179_21
unknown

Not on your lists

comp(18483..18803)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_2_scaffold_179_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(18805..19617)
DNA (813bp) protein (271aa)
TPR-repeat protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXC7_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_179_23
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(19659..20939)
DNA (1281bp) protein (427aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNM4_9EURY
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
Na/H antiporter
13_1_20cm_2_scaffold_179_24
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(21094..21594)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3A7_NITMS
Uncharacterized protein {ECO:0000313|EMBL:ABX12536.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
hypothetical protein
13_1_20cm_2_scaffold_179_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(21640..24126)
DNA (2487bp) protein (829aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASY4_9ARCH rbh
peptidase M1 membrane alanine aminopeptidase Tax=CSP1_1_Thaumarchaeota
peptidase family M1
13_1_20cm_2_scaffold_179_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24393..24884)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3M9_9ARCH
DedA family protein {ECO:0000313|EMBL:AIC16209.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera vienn
DedA family protein
13_1_20cm_2_scaffold_179_27

Not on your lists

comp(24900..25133)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RUX5_CENSY
Uncharacterized protein {ECO:0000313|EMBL:KKL11798.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_179_28
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

25272..25673
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06308.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_179_29
unknown

Not on your lists

25713..26051
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_2_scaffold_179_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(26053..26466)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE38_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59621.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy