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13_1_20cm_2_scaffold_183

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_183_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..496
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFP2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_183_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

474..1010
DNA (537bp) protein (179aa)
id=2650396 Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_183_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1014..1298
DNA (285bp) protein (95aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_183_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1288..2688
DNA (1401bp) protein (467aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZJ1_DESOH
13_1_20cm_2_scaffold_183_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2655..3389)
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_20cm_2_scaffold_183_6
unknown

Not on your lists

comp(3338..3601)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_183_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3607..4488
DNA (882bp) protein (294aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4); K03833 selenocysteine-specific elongation factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1Y0_9FIRM
13_1_20cm_2_scaffold_183_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4519..4710
DNA (192bp) protein (64aa)
Sec-independent protein translocase protein TatA n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=TATA_PELPB
Sec-independent protein translocase TatE; K03116 sec-independent protein translocase protein TatA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
twin-arginine translocation protein, TatA/E family subunit
13_1_20cm_2_scaffold_183_9
unknown

Not on your lists

comp(5087..5221)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_2_scaffold_183_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5317..6288
DNA (972bp) protein (324aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_183_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6272..7906
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8GCJ9_9PSEU
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_183_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7860..8525
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F3F
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_183_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8549..11392
DNA (2844bp) protein (948aa)
ileS; isoleucine tRNA synthetase (EC:6.1.1.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ileS; isoleucine tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN67_9BACT
13_1_20cm_2_scaffold_183_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11455..11967
DNA (513bp) protein (171aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lipoprotein signal peptidase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXN8_DESOH
lipoprotein signal peptidase
13_1_20cm_2_scaffold_183_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11971..12915
DNA (945bp) protein (315aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RluA family pseudouridine synthase n=2 Tax=Arthrospira platensis RepID=K6EGP6_ARTPT
probable pseudouridine synthase
13_1_20cm_2_scaffold_183_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12956..14335
DNA (1380bp) protein (460aa)
gcaD; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=2 Tax=Brevibacillus RepID=J3BCB4_9BACL rbh
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate
13_1_20cm_2_scaffold_183_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14338..16176
DNA (1839bp) protein (613aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH10_9BACT
13_1_20cm_2_scaffold_183_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16257..19490
DNA (3234bp) protein (1078aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-) Tax=GWA2_Rokubacteria_73_35_curated
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYE9_CLOA9
13_1_20cm_2_scaffold_183_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19507..19794
DNA (288bp) protein (96aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK8_9BACT
13_1_20cm_2_scaffold_183_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19794..21245
DNA (1452bp) protein (484aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=GATA_MOOTA
13_1_20cm_2_scaffold_183_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21337..22800
DNA (1464bp) protein (488aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK4_9BACT
13_1_20cm_2_scaffold_183_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

22825..23496
DNA (672bp) protein (224aa)
Cell division ATP-binding protein FtsE n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J502_DESMD
cell division ATP-binding protein FtsE Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
cell division ATP-binding protein FtsE
13_1_20cm_2_scaffold_183_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

23503..24387
DNA (885bp) protein (295aa)
Cell division protein FtsX n=2 Tax=Geobacter metallireducens RepID=Q39UJ0_GEOMG
cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
cell division protein
13_1_20cm_2_scaffold_183_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

24357..25580
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_183_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

25602..26942
DNA (1341bp) protein (447aa)
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102)
Carboxy-terminal-processing protease (C-terminal-processing protease) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL8_9BACT
13_1_20cm_2_scaffold_183_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


26911..27915
DNA (1005bp) protein (335aa)
O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL9_9BACT
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp)
Displaying 26 items

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