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13_1_20cm_2_scaffold_1854

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1854_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3..656)
DNA (654bp) protein (218aa)
Putative hydroxymethylpyrimidine transporter CytX n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWZ0_ROSS1
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:ABQ91143.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.
putative hydroxymethylpyrimidine transporter CytX
13_1_20cm_2_scaffold_1854_2
RLO_PLX_64_10, Bacteria

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comp(914..1294)
DNA (381bp) protein (127aa)
Putative glyoxalase/bleomycin resistance protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IS92_LEPFC
glyoxalase/bleomycin resistance protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
glyoxalase/bleomycin resistance protein
13_1_20cm_2_scaffold_1854_3
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1300..1686)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GN16_CUPNN
Uncharacterized protein {ECO:0000313|EMBL:AEI80204.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necato
hypothetical protein
13_1_20cm_2_scaffold_1854_4

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comp(1830..2234)
DNA (405bp) protein (135aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRW1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL00901.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_1854_5
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(2387..3148)
DNA (762bp) protein (254aa)
fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=RBG_16_Chloroflexi_64_32_curated
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P421_9DELT
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_1854_6

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3306..4064
DNA (759bp) protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL26131.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_1854_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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4171..4656
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002E97040
MerR family transcriptional regulator Tax=RBG_16_Chloroflexi_64_32_curated
MerR family transcriptional regulator
13_1_20cm_2_scaffold_1854_8
unknown

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comp(4748..4969)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_2_scaffold_1854_9
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(5123..5374)
DNA (252bp) protein (84aa)
redoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Redoxin n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10ZL7_TRIEI
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RBG_13_Chloroflexi_60_13_curated
13_1_20cm_2_scaffold_1854_10
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5444..5581)
DNA (138bp) protein (46aa)
Putative peroxiredoxin {ECO:0000313|EMBL:KJF21918.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KJF21918.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sourc
Peroxiredoxin AhpE n=1 Tax=Rhodococcus erythropolis CCM2595 RepID=T1VR49_RHOER
peroxiredoxin AhpE
13_1_20cm_2_scaffold_1854_11
unknown

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comp(5592..6002)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_2_scaffold_1854_12
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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6076..7242
DNA (1167bp) protein (389aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RBG_16_Chloroflexi_64_32_curated
det:DET1282 proB; gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] alias=scaffold_7_54,RBG2_C00007G00054 id=1242250 tax=RBG2 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi rbh
glutamate 5-kinase
13_1_20cm_2_scaffold_1854_13
RBG_16_Archaea_50_20_curated, Archaea

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7252..7635
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036081DE
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_1854_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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7632..8804
DNA (1173bp) protein (391aa)
Acetyl-CoA acetyltransferase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CMF3_SYNLT rbh
acetyl-CoA acetyltransferase Tax=RBG_16_Chloroflexi_64_32_curated
acetyl-CoA acetyltransferase
13_1_20cm_2_scaffold_1854_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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8801..9220
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C160_SPHTD
hypothetical protein; K07068 Tax=RBG_16_Chloroflexi_64_32_curated
hypothetical protein
13_1_20cm_2_scaffold_1854_16
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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9309..9404
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML71_9BACT
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
13_1_20cm_2_scaffold_1854_17
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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9446..10726
DNA (1281bp) protein (427aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RBG_13_Actinobacteria_63_9_curated
deh:cbdb_A1224 proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] alias=scaffold_7_55,RBG2_C00007G00055 id=1242251 tax=RBG2 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi rbh
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
13_1_20cm_2_scaffold_1854_18
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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10764..11105
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=uncultured Chloroflexi bacterium HF0500_03M05 RepID=E0XY68_9CHLR
hypothetical protein Tax=RBG_13_Actinobacteria_63_9_curated
13_1_20cm_2_scaffold_1854_19

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comp(11119..11547)
DNA (429bp) protein (143aa)
Cation diffusion facilitator family transporter n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D987_DESAJ
Uncharacterized protein {ECO:0000313|EMBL:KKL44710.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cation diffusion facilitator family transporter
13_1_20cm_2_scaffold_1854_20
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(11565..12005)
DNA (441bp) protein (147aa)
UPI0003D64F34 related cluster n=1 Tax=unknown RepID=UPI0003D64F34
cation efflux protein Tax=RBG_16_Chloroflexi_64_32_curated
cation transporter
13_1_20cm_2_scaffold_1854_21

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comp(12131..12904)
DNA (774bp) protein (258aa)
adg:Adeg_0470 transketolase central region; K00615 transketolase [EC:2.2.1.1] alias=scaffold_1_33,RBG2_C00001G00033 id=1241012 tax=RBG2 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
Marine sediment metagenome DNA, contig: S01H1_L06143 {ECO:0000313|EMBL:GAF71941.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
tklB; transketolase, B protein
13_1_20cm_2_scaffold_1854_22

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comp(12939..13925)
DNA (987bp) protein (329aa)
adg:Adeg_0469 transketolase domain protein; K00615 transketolase [EC:2.2.1.1] alias=scaffold_1_34,RBG2_C00001G00034 id=1241013 tax=RBG2 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
Marine sediment metagenome DNA, contig: S01H1_S27617 {ECO:0000313|EMBL:GAG41445.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transketolase
13_1_20cm_2_scaffold_1854_23
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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14036..14875
DNA (840bp) protein (280aa)
amidohydrolase 2; K07045 Tax=RBG_16_Chloroflexi_64_32_curated
dly:Dehly_1588 amidohydrolase 2; K07045 alias=scaffold_16_30,RBG2_C00016G00030 id=1242929 tax=RBG2 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
amidohydrolase 2
13_1_20cm_2_scaffold_1854_24

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14868..15449
DNA (582bp) protein (194aa)
2'-5' RNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2N8_DEHLB
Marine sediment metagenome DNA, contig: S01H1_S16602 {ECO:0000313|EMBL:GAG17445.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2'-5' RNA ligase
13_1_20cm_2_scaffold_1854_25
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(15611..16588)
DNA (978bp) protein (326aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_16_Chloroflexi_64_32_curated
UDP-glucose 4-epimerase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002898C85
UDP-glucose-4-epimerase
13_1_20cm_2_scaffold_1854_26
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(16809..16919)
DNA (111bp) protein (37aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Chloroflexi_64_32_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WWA2_ALIAD
3-oxoacyl-(acyl-carrier-protein) synthase 2
Displaying 26 items

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