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13_1_20cm_2_scaffold_2016

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2016_1
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..857)
DNA (855bp) protein (285aa)
ABC transporter substrate-binding protein n=1 Tax=Salinispora arenicola RepID=UPI0002FA3C92
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_13_Chloroflexi_68_17_curated
peptide ABC transporter,substrate-binding protein
13_1_20cm_2_scaffold_2016_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

872..1795
DNA (924bp) protein (308aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT alias=16ft_combo_ws3_scaffold_136_4 id=5223515 tax=16ft_combo_ws3 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
putative proline dehydrogenase
13_1_20cm_2_scaffold_2016_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1805..3661
DNA (1857bp) protein (619aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
13_1_20cm_2_scaffold_2016_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3658..4671
DNA (1014bp) protein (338aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
2-oxoglutarate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX70_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
13_1_20cm_2_scaffold_2016_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4668..4913
DNA (246bp) protein (82aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_2016_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5025..5723
DNA (699bp) protein (233aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARY8_RUBXD
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:ABG05840.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; R
peptidase S8/S53 subtilisin kexin sedolisin
13_1_20cm_2_scaffold_2016_7
Bacillus sp., Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5720..6388
DNA (669bp) protein (223aa)
SprB n=2 Tax=Bacillus sp. RepID=Q45464_BACSP
SprB {ECO:0000313|EMBL:AAC43578.1}; TaxID=1409 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp.;"
peptidase S8
13_1_20cm_2_scaffold_2016_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6552..7223
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH21_9BACT
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD family hydrolase
13_1_20cm_2_scaffold_2016_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7220..9646)
DNA (2427bp) protein (809aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWI0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_2_scaffold_2016_10
unknown

Not on your lists

9913..10164
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_2_scaffold_2016_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10195..11079)
DNA (885bp) protein (295aa)
Peptide methionine sulfoxide reductase msrB n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U0L2_DESML
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase Tax=CSP1_2_Dadabacteria
peptide methionine sulfoxide reductase
13_1_20cm_2_scaffold_2016_12
R_NC10_66_22, NC10, Bacteria

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11287..11970
DNA (684bp) protein (228aa)
DNA-binding response regulator in two-component system with YedV n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEX8_9CHLR
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
13_1_20cm_2_scaffold_2016_13
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11963..13375
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIF2_MOOTA
sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_2016_14
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13432..14565)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9S1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK07512.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
putative 3-carboxymuconate cyclase
13_1_20cm_2_scaffold_2016_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14689..16428
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FCAF6
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PQQ-dependent dehydrogenase, methanol/ethanol family
13_1_20cm_2_scaffold_2016_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16440..16889
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cytochrome c class I
13_1_20cm_2_scaffold_2016_17

Not on your lists

16976..17584
DNA (609bp) protein (203aa)
Marine sediment metagenome DNA, contig: S01H4_L05693 {ECO:0000313|EMBL:GAG85163.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_2016_18
unknown

Not on your lists

comp(17526..17969)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_2_scaffold_2016_19
unknown

Not on your lists

comp(18059..18253)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_2_scaffold_2016_20

Not on your lists

comp(18308..20032)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003639826 rbh
FG-GAP repeat-containing protein {ECO:0000313|EMBL:AHN97875.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
FG-GAP repeat domain-containing protein
13_1_20cm_2_scaffold_2016_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20050..21084)
DNA (1035bp) protein (345aa)
Surface antigen, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3E8_SALRD
Surface antigen, putative {ECO:0000313|EMBL:ABC44983.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
surface antigen
13_1_20cm_2_scaffold_2016_22

Not on your lists

comp(21081..23504)
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6A155 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHN97873.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
hypothetical protein
13_1_20cm_2_scaffold_2016_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23572..24291)
DNA (720bp) protein (240aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A656_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG88322.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
13_1_20cm_2_scaffold_2016_24
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(24343..25332)
DNA (990bp) protein (330aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Desmospora sp. 8437 RepID=F5SBF1_9BACL
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
13_1_20cm_2_scaffold_2016_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25416..26660
DNA (1245bp) protein (415aa)
Beta-lactamase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJA7_KORVE
Beta-lactamase {ECO:0000313|EMBL:AHG93328.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
beta-lactamase
13_1_20cm_2_scaffold_2016_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

26683..27036
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RFG8_MYCXE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_2016_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

27036..27584
DNA (549bp) protein (183aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_2016_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(27538..29004)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI0003699347
DNA polymerase III subunit alpha Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PKD domain containing protein
Displaying 28 items

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