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13_1_20cm_2_scaffold_2060

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2060_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..153)
DNA (153bp) protein (51aa)
Elongation factor Tu n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=EFTU_KORVE
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus K
tuf; elongation factor Tu
13_1_20cm_2_scaffold_2060_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(184..519)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHG5_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF43685.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_2_scaffold_2060_trna_4
unknown

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comp(555..627)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_2060_trna_3
unknown

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comp(648..719)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_2060_3
unknown

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comp(749..931)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_2_scaffold_2060_trna_2
unknown

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comp(998..1083)
DNA (86bp)
transferRNA
13_1_20cm_2_scaffold_2060_trna_1
unknown

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comp(1345..1417)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_2060_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1601..1894)
DNA (294bp) protein (98aa)
Histone-like DNA-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL3_KORVE
Histone-like DNA-binding protein {ECO:0000313|EMBL:ABF39087.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
histone-like DNA-binding protein
13_1_20cm_2_scaffold_2060_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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2158..2814
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VK2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_2_scaffold_2060_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2929..3417)
DNA (489bp) protein (163aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABF39088.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ABF39088.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacter
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL2_KORVE
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_20cm_2_scaffold_2060_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3551..4246
DNA (696bp) protein (232aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL1_KORVE
Response regulator receiver protein {ECO:0000313|EMBL:ABF39089.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
response regulator receiver protein
13_1_20cm_2_scaffold_2060_8
unknown

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4414..4644
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_2_scaffold_2060_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4796..5701)
DNA (906bp) protein (302aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL0_KORVE
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
13_1_20cm_2_scaffold_2060_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5863..6768)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH2_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39128.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_2_scaffold_2060_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6815..7264)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXV2_CORCM
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
hypothetical protein
13_1_20cm_2_scaffold_2060_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7404..8186)
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH3_KORVE
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF39127.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_2060_13
GWA2_RIF03_38_11_curated, RIF3, Bacteria

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8385..9008
DNA (624bp) protein (208aa)
TonB-dependent receptor n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKB0_GEOS8
outer membrane receptor for ferrienterochelin and colicins Tax=GWA2_RIF03_38_11_curated
TonB-dependent receptor
Displaying 17 items

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