ggKbase home page

13_1_20cm_2_scaffold_2102

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2102_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(45..1763)
DNA (1719bp) protein (573aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_2102_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1894..3387)
DNA (1494bp) protein (498aa)
pepA; cytosol aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWY8_RUBXD rbh
13_1_20cm_2_scaffold_2102_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3389..4528)
DNA (1140bp) protein (380aa)
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Isocitrate dehydrogenase [NADP] n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TCL8_HELMI
icd; isocitrate dehydrogenase, nADP-dependent
13_1_20cm_2_scaffold_2102_4
unknown

Not on your lists

4596..4937
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_5
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4974..6026
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PC06_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX08343.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
13_1_20cm_2_scaffold_2102_6
unknown

Not on your lists

6043..6588
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_7
unknown

Not on your lists

6592..7146
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7202..7642
DNA (441bp) protein (147aa)
Peptidase families S8 and S53 domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FTS5_STIAD
Peptidase families S8 and S53 domain protein {ECO:0000313|EMBL:ADO70877.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigm
peptidase families s8 and s53 domain-containing protein
13_1_20cm_2_scaffold_2102_9
unknown

Not on your lists

comp(7670..8032)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_10
unknown

Not on your lists

comp(8089..8481)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_11
unknown

Not on your lists

comp(8494..8916)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8992..9327)
DNA (336bp) protein (112aa)
Phosphoesterase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR81_KORVE
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
phosphoesterase
13_1_20cm_2_scaffold_2102_13
unknown

Not on your lists

comp(9372..10091)
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_14
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10178..12226)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68870.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
13_1_20cm_2_scaffold_2102_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12656..13024)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADC5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40502.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_2_scaffold_2102_trna_1
unknown

Not on your lists

comp(13407..13490)
DNA (84bp)
transferRNA
13_1_20cm_2_scaffold_2102_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13497..13808)
DNA (312bp) protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_2102_17
unknown

Not on your lists

14018..14470
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_18
Musca domestica, Musca, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(14719..15258)
DNA (540bp) protein (180aa)
Lectin C-type domain protein {ECO:0000313|EMBL:AFP61768.1}; TaxID=7370 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; M
GM16758 gene product from transcript GM16758-RA
13_1_20cm_2_scaffold_2102_19
unknown

Not on your lists

comp(15259..15693)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_2_scaffold_2102_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15690..16241)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_1_20cm_2_scaffold_2102_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16384..16512
DNA (129bp) protein (43aa)
TetR family transcriptional regulator Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 22 items

View Taxonomy