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13_1_20cm_2_scaffold_2165

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2165_1
unknown

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comp(1..354)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_2_scaffold_2165_2
RBG_16_Archaea_50_20_curated, Archaea

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979..1527
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N625_9ARCH
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_2165_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1582..3234)
DNA (1653bp) protein (551aa)
Thermosome n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX35_FERPA
thsA-2; Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha subunit) (thsA) Tax=RBG_16_Archaea_50_20_curated
thermosome
13_1_20cm_2_scaffold_2165_4
unknown

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3475..3888
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_2_scaffold_2165_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(3892..4452)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZL81_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2165_6
RBG_16_Archaea_50_20_curated, Archaea

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4464..5837
DNA (1374bp) protein (458aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RBG_16_Archaea_50_20_curated
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparaginyl-tRNA synthetase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8T9_9ARCH
13_1_20cm_2_scaffold_2165_7
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(6047..6991)
DNA (945bp) protein (315aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:BAJ47304.1}; EC=1.1.1.95 {ECO:0000313|EMBL:BAJ47304.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Cal
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4T5_9ARCH
13_1_20cm_2_scaffold_2165_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(7001..8395)
DNA (1395bp) protein (465aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
NADH oxidase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HI86_PYRSN
NADH oxidase (noxA-2)
13_1_20cm_2_scaffold_2165_9
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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8493..9221
DNA (729bp) protein (243aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ADN49774.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ADN49774.1};; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae;
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTX7_VULDI
13_1_20cm_2_scaffold_2165_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9313..9984
DNA (672bp) protein (224aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Triosephosphate isomerase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG09_PYRYC
triosephosphate isomerase
13_1_20cm_2_scaffold_2165_11
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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10033..10518
DNA (486bp) protein (162aa)
ctaA; heme A synthase (EC:1.3.-.-) Tax=RBG_16_KB1_OP1_55_9_curated
Cytochrome oxidase assembly protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU38_9BACT
heme A synthase
13_1_20cm_2_scaffold_2165_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10603..11259
DNA (657bp) protein (219aa)
Cytochrome c oxidase, subunit II n=1 Tax=Halobacterium sp. DL1 RepID=G4IGR3_9EURY
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:AHG04422.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
cytochrome c oxidase subunit II
13_1_20cm_2_scaffold_2165_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11261..12517
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJN58781.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sa
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_20cm_2_scaffold_2165_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12595..13623
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000370EEDD
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJN58781.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sa
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_20cm_2_scaffold_2165_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13633..13902
DNA (270bp) protein (90aa)
hypothetical protein; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1]
Uncharacterized protein n=4 Tax=Haloferax RepID=M0FN79_9EURY
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_2165_16
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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13962..14819
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E310_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA05203.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_20cm_2_scaffold_2165_17
uncultured marine crenarchaeote HF4000_ANIW97P9, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14985..15425)
DNA (441bp) protein (147aa)
Putative copper-binding protein, plastocyanin/azurin family protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97P9 RepID=B3T3H2_9ARCH
Putative copper-binding protein, plastocyanin/azurin family protein {ECO:0000313|EMBL:ABZ07131.1}; TaxID=455569 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="unc
blue (type1) copper domain-containing protein
13_1_20cm_2_scaffold_2165_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15631..16563
DNA (933bp) protein (311aa)
geranylgeranylglyceryl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Archaea_50_20_curated
idsA; IdsA (EC:2.5.1.10 2.5.1.1)
IdsA n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NG10_METST
13_1_20cm_2_scaffold_2165_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

16644..17015
DNA (372bp) protein (124aa)
NADH-ubiquinone oxidoreductase, subunit A n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU02_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 Tax=RBG_16_Archaea_50_20_curated
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
13_1_20cm_2_scaffold_2165_20
RBG_16_Archaea_50_20_curated, Archaea

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17023..18024
DNA (1002bp) protein (334aa)
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U2_NITGG
13_1_20cm_2_scaffold_2165_21
RBG_16_Archaea_50_20_curated, Archaea

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18031..18525
DNA (495bp) protein (165aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
13_1_20cm_2_scaffold_2165_22
RBG_16_Archaea_50_20_curated, Archaea

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18530..18838
DNA (309bp) protein (103aa)
NADH dehydrogenase subunit K n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EM07_9ARCH
NADH-ubiquinone oxidoreductase subunit 4L Tax=RBG_16_Archaea_50_20_curated
NADH-ubiquinone oxidoreductase subunit 4L
13_1_20cm_2_scaffold_2165_23
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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18846..19910
DNA (1065bp) protein (355aa)
NADH:ubiquinone oxidoreductase subunit 4 (chain M) (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit 4 (Chain M) n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L375_KORCO
proton-translocating NADH-quinone oxidoreductase subunit M Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_2165_24
RBG_16_Archaea_50_20_curated, Archaea

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20285..21427
DNA (1143bp) protein (381aa)
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit L n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
Displaying 24 items

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