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13_1_20cm_2_scaffold_2181

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2181_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3..974)
DNA (972bp) protein (324aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1)
cytochrome c oxidase subunit I Tax=RBG_16_Euryarchaeota_68_13_curated
cytochrome coxidase subunit I alias=RBG9_12_111,RBG9_C00012G00111 id=1244915 tax=RBG9 species=Burkholderia ambifaria genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
13_1_20cm_2_scaffold_2181_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1020..1334)
DNA (315bp) protein (105aa)
caa(3)-type oxidase, subunit IV
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_2181_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1349..2170)
DNA (822bp) protein (274aa)
coxP; cytochrome c oxidase subunit III (EC:1.9.3.1)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
cytochrome C oxidase subunit I Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_2181_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2211..3791
DNA (1581bp) protein (527aa)
cytochrome c oxidase polypeptide II (EC:1.9.3.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase, subunit II n=1 Tax=Halobacterium sp. DL1 RepID=G4IGA5_9EURY
13_1_20cm_2_scaffold_2181_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3867..5573
DNA (1707bp) protein (569aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI000379BBEA rbh
frdA; fumarate reductase flavoprotein subunit frdA
13_1_20cm_2_scaffold_2181_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5573..6331
DNA (759bp) protein (253aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) Tax=RBG_16_Euryarchaeota_68_12_curated
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Putative fumarate reductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WPE9_9NOCA
13_1_20cm_2_scaffold_2181_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6336..6740
DNA (405bp) protein (135aa)
frdC; Putative fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1) Tax=RBG_16_Euryarchaeota_68_12_curated
frdC; Putative fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1)
Fumarate reductase subunit C n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8ALZ4_PLESH
13_1_20cm_2_scaffold_2181_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6740..7153
DNA (414bp) protein (138aa)
fumarate reductase subunit D
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_2181_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7156..7413)
DNA (258bp) protein (86aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
Translation elongation factor-like protein
hypothetical protein alias=gwa2_scaffold_32_209 id=5040077 tax=GW2011_AR20 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_desc=DELETE: see complete genome
13_1_20cm_2_scaffold_2181_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7463..7741)
DNA (279bp) protein (93aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_2181_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7866..8081
DNA (216bp) protein (72aa)
Small nuclear ribonucleoprotein n=2 Tax=Methanomassiliicoccus RepID=U5Q212_9EURY
Like-Sm ribonucleoprotein core; K04796 small nuclear ribonucleoprotein Tax=RBG_16_Euryarchaeota_68_12_curated
Like-Sm ribonucleoprotein core
13_1_20cm_2_scaffold_2181_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8140..9147
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036033DF
nucleotidyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
nucleotidyltransferase
13_1_20cm_2_scaffold_2181_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9144..10502
DNA (1359bp) protein (453aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_16_Euryarchaeota_67_27_curated
bifunctional phosphomannomutase/phosphoglucomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase, C-terminal domain family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFH1_ACIB4
13_1_20cm_2_scaffold_2181_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(10531..11304)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_2_scaffold_2181_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(11341..12480)
DNA (1140bp) protein (380aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
flap structure-specific endonuclease
13_1_20cm_2_scaffold_2181_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(12551..14521)
DNA (1971bp) protein (657aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_16_Euryarchaeota_68_12_curated
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
13_1_20cm_2_scaffold_2181_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(14539..19668)
DNA (5130bp) protein (1710aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_16_Euryarchaeota_68_12_curated
predicted protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=UPI0001FE335F
OmpA/MotB domain-containing protein
13_1_20cm_2_scaffold_2181_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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19812..20258
DNA (447bp) protein (149aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_2181_19

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comp(20286..21128)
DNA (843bp) protein (281aa)
Band 7 integral membrane protein-like protein n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L232_PICTO
Marine sediment metagenome DNA, contig: S01H1_S10819 {ECO:0000313|EMBL:GAG05883.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_2_scaffold_2181_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21315..21761)
DNA (447bp) protein (149aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_2181_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(21840..22511)
DNA (672bp) protein (224aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_Euryarchaeota_68_12_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IA71_ACIB4
13_1_20cm_2_scaffold_2181_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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22656..23219
DNA (564bp) protein (188aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Transketolase, N-terminal subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYI8_PELTS
transketolase, N-terminal subunit
Displaying 22 items

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